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Protein Overview: wdr-23

General Information:
Name(s) found: wdr-23 / CE23620 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00008419 locus:wdr-23 DDB1- and CUL4-associated factor 11 homolog status:Confirmed UniProt:P90794 protein_id:CAB54209.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 530 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of growth rate [IMPLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: subtilase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYKRHSSSN LKRNHSNDSD TDFSSDDEGC PKMTPHEEQQ MFEREQHIAF SGRCHIGDPE  60
   61 SCTQLRNEIN SRCGPRPSTS NNMEFILNRD LQKRGTSISN PRTVARVLNS HLPNQKRRVD 120
  121 RVATKSFCTQ YIQNGTKIVV ASQDEKIRFY QRNPDKSKYR SKYMKSDELR VDQCGWSILD 180
  181 TAISLNGDLI AYGTWKDAVF VGKLDFTERQ NITWFPIDLN GEPGRDHCAV FCVKFSDSSE 240
  241 QIVCGTSQYS IHVFDVEQRR RIRTIVNAHE DDVNSVCFAD LGSNLIYSAG DDGLVKVWDK 300
  301 RAWSDGDVEP VGVFAGHRDG VTHVDSRQDE RYLLSNSKDQ TIKVWDLRKF SNMSGVEATR 360
  361 ACVQSQHWDY RWQPAPPGLC QPVAGDTSVM TLRGHSVLHT LVRANFSPES TGRRYIYTGC 420
  421 ARGEVVVYDI MSGTVSRRLK GHTAVVRECD WHPTENEIVS SAWDGVTTVW TWDERQEGVI 480
  481 APYDHPNISQ FGDEDSCDEL FQPVKKQCRR QRKTMSSRGH PCSSSSISQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 72.30103 PAF-AH Holoenzyme: Lis1/Alfa2
    2 View Details [123..530] PSI-BLAST 25.39794 Arp2/3 complex 41 kDa subunit ARPC1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.79788997337153 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  1.73465159850484 bayes_pls_golite062009
  • protein binding
    		•  1.11897341394404 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle