| Protein: | wdr-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wdr-23.
| Description | E-value | Query Range |
Subject Range |
|
|
595.0 | [0..2] | [530..1167] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MPYKRHSSSN LKRNHSNDSD TDFSSDDEGC PKMTPHEEQQ MFEREQHIAF SGRCHIGDPE 60
61 SCTQLRNEIN SRCGPRPSTS NNMEFILNRD LQKRGTSISN PRTVARVLNS HLPNQKRRVD 120
121 RV
|
| Detection Method: |  |
| Confidence: | 72.30103 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-530] |
1 11 21 31 41 51
| | | | | |
1 ATKSFCTQYI QNGTKIVVAS QDEKIRFYQR NPDKSKYRSK YMKSDELRVD QCGWSILDTA 60
61 ISLNGDLIAY GTWKDAVFVG KLDFTERQNI TWFPIDLNGE PGRDHCAVFC VKFSDSSEQI 120
121 VCGTSQYSIH VFDVEQRRRI RTIVNAHEDD VNSVCFADLG SNLIYSAGDD GLVKVWDKRA 180
181 WSDGDVEPVG VFAGHRDGVT HVDSRQDERY LLSNSKDQTI KVWDLRKFSN MSGVEATRAC 240
241 VQSQHWDYRW QPAPPGLCQP VAGDTSVMTL RGHSVLHTLV RANFSPESTG RRYIYTGCAR 300
301 GEVVVYDIMS GTVSRRLKGH TAVVRECDWH PTENEIVSSA WDGVTTVWTW DERQEGVIAP 360
361 YDHPNISQFG DEDSCDELFQ PVKKQCRRQR KTMSSRGHPC SSSSISQN
|
| Detection Method: | |
| Confidence: | 25.39794 |
| Match: | 1k8kC |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.79788997337153 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 1.73465159850484 | bayes_pls_golite062009 |
| protein binding | 1.11897341394404 | bayes_pls_golite062009 |
