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Protein Overview: olrn-1

General Information:
Name(s) found: olrn-1 / CE23514 [WormBase]
Description(s) found:
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  • WBGene00007260 locus:olrn-1 status:Partially_confirmed UniProt:Q93174 protein_id:CAB01856.2 [WormBase]
  • pir||T18858 hypothetical protein C02C6.2 - Caenorhabditis elegans [NCBI NR]
  • gi|71981903|ref|NP_001024334.1| Olfactory LeaRNing defective family member (olrn-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|5832748|emb|CAB01856.2| C. elegans protein C02C6.2b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_510565.1| putative protein, with a transmembrane domain, of bilaterial origin (XQ163) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE23514 WBGene00007260 status:Partially_confirmed TR:Q93174 protein_id:CAB01856.2 [wormpep150.fasta]
  • 23514 WBGene00007260 status:Partially_confirmed TR:Q93174 protein_id:CAB01856.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein, with a transmembrane domain, of bilaterial origin (XQ163) [Caenorhabditis elegans]gi|5832748|emb|CAB01856.2| Hypothetical protein C02C6.2 [Caenorhabditis elegans]gi|7495188|pir||T18858 hypothetical protein C02C6.2 - Caenorhabditis eleg [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q93174 protein_id:CAB01856.2 [wormpep115.fasta.reversed]
  • CE23514 status:Partially_confirmed TR:Q93174 protein_id:CAB01856.2 [wormpep80.hongbin]
  • CE23514 WBGene00007260 locus:olrn-1 status:Partially_confirmed UniProt:Q93174_CAEEL protein_id:CAB01856.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE23514 WBGene00007260 locus:olrn-1 status:Partially_confirmed UniProt:Q93174_CAEEL protein_id:CAB01856.2| [wormORF-contam.fasta]
  • Hypothetical protein C02C6.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C02C6.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE23514 WBGene00007260 locus:olrn-1 status:Partially_confirmed TR:Q93174 protein_id:CAB01856.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE23514 WBGene00007260 locus:olrn-1 status:Partially_confirmed UniProt:Q93174 protein_id:CAB01856.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Isoform of Q564X8, Uncharacterized protein OS=Caenorhabditis elegans GN=olrn-1 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRCSAPREI SVSEETTEKS GRKSPKSPIE CRKLSKAPPL CCKNGEECKV AGNCVCKPPK  60
   61 PTGPNDEKPT SSRETYDVFL GGSCGTTVWR RQSVIPFLKK RGITYYDPQR SFWSENMIYE 120
  121 ESIAKESSSL FLFVIDPATV NATSFLEIAY FAARKSPKLV VVFLGKTEWA EKAHPDDLPD 180
  181 RNRTCQLLDR ILECHQVPML HTIPDALEFI EEEMLGRQSL TEAMRSKNNR LPYLQIRARR 240
  241 VVRNVKSLAA QTIKVCKNYA TKTVVTGLID LTVLLSISFA FPALPLFYIL VPLLMLNIVF 300
  301 FGVIYKVQEL RKRYPRMIAD SSAVMYHATA AIPSPRVTLK ATNVNGTISS KTLVRRRSKQ 360
  361 NFEKFFPDDS GASSFIVPSS FLPKQHETKV NIDCSVVELC SSSPDDNSWV QELAAPTLDG 420
  421 KGTPYSYVLA TPNFQLDNRM NCLRTWFHHH KKFFYYIPST TTFLSGMVEI AYILGHTNWE 480
  481 GTVCVPATSQ ILEGPDDMTA DEKDHARAAR RRRNDCYQIA FCYLKDMAKR RQCRVFTDIG 540
  541 VAVKALVDPA IRGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] MSA 1.008987 View MSA. No confident structure predictions are available.
    2 View Details [114..264] MSA 1.008979 View MSA. No confident structure predictions are available.
    3 View Details [265..421] deduced N/A No confident structure predictions are available.
    4 View Details [422..554] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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