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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: olrn-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRCSAPREI SVSEETTEKS GRKSPKSPIE CRKLSKAPPL CCKNGEECKV AGNCVCKPPK  60
   61 PTGPNDEKPT SSRETYDVFL GGSCGTTVWR RQSVIPFLKK RGITYYDPQR SFWSENMIYE 120
  121 ESIAKESSSL FLFVIDPATV NATSFLEIAY FAARKSPKLV VVFLGKTEWA EKAHPDDLPD 180
  181 RNRTCQLLDR ILECHQVPML HTIPDALEFI EEEMLGRQSL TEAMRSKNNR LPYLQIRARR 240
  241 VVRNVKSLAA QTIKVCKNYA TKTVVTGLID LTVLLSISFA FPALPLFYIL VPLLMLNIVF 300
  301 FGVIYKVQEL RKRYPRMIAD SSAVMYHATA AIPSPRVTLK ATNVNGTISS KTLVRRRSKQ 360
  361 NFEKFFPDDS GASSFIVPSS FLPKQHETKV NIDCSVVELC SSSPDDNSWV QELAAPTLDG 420
  421 KGTPYSYVLA TPNFQLDNRM NCLRTWFHHH KKFFYYIPST TTFLSGMVEI AYILGHTNWE 480
  481 GTVCVPATSQ ILEGPDDMTA DEKDHARAAR RRRNDCYQIA FCYLKDMAKR RQCRVFTDIG 540
  541 VAVKALVDPA IRGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle