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Protein Overview: CE23435

General Information:
Name(s) found: CE23435 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00021252 status:Partially_confirmed TR:Q965P2 protein_id:AAK84588.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNFSSTVTQ VLQKYRLNGV DIDWEFPVWS RDAQKSDKAH FATFLRILKS HLKPADLKLS  60
   61 VAVSGPPTIS RKAYDVDALK MYADMVQIMN YDFHVFNRYS NPFVGFNAPL HPMRAEISVL 120
  121 GEMNAEASMK TWYDLGLPRN ISFFGIPTYA RAFQLLTHYL HKPYSPAIRA RPEITNLPDV 180
  181 CIFAQSGYYT TVWNHHAQAP YLYGDDGIWV SYENQQSILA KMAFARKLQV GGVMVFSIGS 240
  241 DDVTGKCGHG PYPLLTKISK LANF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 71.221849 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.00445818053203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle