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View Structure Prediction Details

Protein: CE23435
Organism: Caenorhabditis elegans
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23435.

Description E-value Query
Range
Subject
Range
gi|91079784 - gi|91079784|ref|XP_967813.1| PREDICTED: similar to brain chitinase and chia [Tribolium castaneum]
281.0 [0..2] [262..110]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNFSSTVTQ VLQKYRLNGV DIDWEFPVWS RDAQKSDKAH FATFLRILKS HLKPADLKLS  60
   61 VAVSGPPTIS RKAYDVDALK MYADMVQIMN YDFHVFNRYS NPFVGFNAPL HPMRAEISVL 120
  121 GEMNAEASMK TWYDLGLPRN ISFFGIPTYA RAFQLLTHYL HKPYSPAIRA RPEITNLPDV 180
  181 CIFAQSGYYT TVWNHHAQAP YLYGDDGIWV SYENQQSILA KMAFARKLQV GGVMVFSIGS 240
  241 DDVTGKCGHG PYPLLTKISK LANF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle