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Protein Overview: dcs-1

General Information:
Name(s) found: dcs-1 / CE23280 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00000940 locus:dcs-1 m7GpppX diphosphatase status:Confirmed UniProt:G5EFS4 protein_id:CAB60481.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: DNA repair [IMPLink to PubMed article]
    deadenylation-dependent decapping of nuclear-transcribed mRNA [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    m7G(5')pppN diphosphatase activity [IDALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIADEELV REERAEESTQ KWLQDAKFQE ILGADSSHKS LFVLLSHPDG SQGILLANKS  60
   61 PFSEEKSDIE KLLATAQLQE ISRNDIFGSY NIEIDPKLNL LKSQLIYPIN DRLIAKYRQE 120
  121 EKFVIRETPE LYETVTRPYI EKYQLNLNWV YNCLEKRSEV DKIVFEDPDN ENGFVLLQDI 180
  181 KWDGKTLENL YVLAICHRHG LKSVRDLTGD DLEMLYNMRD KSLEAINQKY GLKTDQIKCY 240
  241 FHYQPSFYHL HVHFINLKYD APASTTMSAI LLDDVINNLE LNPEHYKKST LTFTRKNGDK 300
  301 LMEMFREALK N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 105.0 Structure of human Dcps

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • m7G(5')pppN diphosphatase activity
    		•  11.4290795741181 bayes_pls_golite062009
  • RNA binding
    		•  2.65561768780165 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.24536295645879 bayes_pls_golite062009
  • binding
    		•  1.12315862086587 bayes_pls_golite062009
  • hydrolase activity
    		•  0.927269748430359 bayes_pls_golite062009
  • catalytic activity
    		•  0.096119422680995 bayes_pls_golite062009
  • protein binding
    		•  0.0635855651106229 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle