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Protein Overview: chp-1

General Information:
Name(s) found: chp-1 / CE23244 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000502 locus:chp-1 status:Confirmed UniProt:G5EEI8 protein_id:CCD66204.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    establishment of mitotic spindle localization [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDESKLQCY HKGCGLLFDP KENDNEACTY HPGGPYFHDA YKIWTCCDKK STDFGTWMNY  60
   61 KGCTRGKHSN EKPVDIVKVA AVKEIRPEKE EDVIVWKGLN KSGKLDSKDA TKRIEQNLNV 120
  121 EVTPGATAAI EKKLKEISEA AQSADIQIGA PCRNNGCSTE FDGSKNKENC QHHPGAAIFH 180
  181 EGMKYWSCCN KKTSNFGAFL EQVGCTSGEH KFRNNEIVSK FREDWFSSNG FVTINVYCRG 240
  241 ALPETANIVS DGHTVRVSMK HGFGNASVDL DYDLWDEVIP EESRVVIGER KVEISLKQKH 300
  301 GTGWPRLKFD PELDAKNDEE A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] FFAS03 1.07 Transcription factor IIIA, TFIIIA
    2 View Details [209..321] PSI-BLAST 26.0 Solution structure of human Sgt1 CS domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.35753576771772 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.74211775141609 bayes_pls_golite062009
  • DNA binding
    		•  1.70652025786664 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.65800387833926 bayes_pls_golite062009
  • protein binding
    		•  0.952480850696098 bayes_pls_golite062009
  • transcription factor activity
    		•  0.821600574857386 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.3360635562029 bayes_pls_golite062009
  • protein binding
    		•  0.743263427072441 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle