| Protein: | chp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 321 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for chp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..4] | [319..312] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MVDESKLQCY HKGCGLLFDP KENDNEACTY HPGGPYFHDA YKIWTCCDKK STDFGTWMNY 60
61 KGCTRGKHSN EKPVDIVKVA AVKEIRPEKE EDVIVWKGLN KSGKLDSKDA TKRIEQNLNV 120
121 EVTPGATAAI EKKLKEISEA AQSADIQIGA PCRNNGCSTE FDGSKNKENC QHHPGAAIFH 180
181 EGMKYWSCCN KKTSNFGAFL EQVGCTSG
|
| Detection Method: |  |
| Confidence: | 1.07 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.35753576771772 | bayes_pls_golite062009 |
| nucleic acid binding | 1.74211775141609 | bayes_pls_golite062009 |
| DNA binding | 1.70652025786664 | bayes_pls_golite062009 |
| transcription regulator activity | 1.65800387833926 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| transcription factor activity | 0.821600574857386 | bayes_pls_golite062009 |
|
Region A: Residues: [209-321] |
1 11 21 31 41 51
| | | | | |
1 EHKFRNNEIV SKFREDWFSS NGFVTINVYC RGALPETANI VSDGHTVRVS MKHGFGNASV 60
61 DLDYDLWDEV IPEESRVVIG ERKVEISLKQ KHGTGWPRLK FDPELDAKND EEA
|
| Detection Method: | |
| Confidence: | 26.0 |
| Match: | 1rl1A |
| Description: | Solution structure of human Sgt1 CS domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.3360635562029 | bayes_pls_golite062009 |
| protein binding | 0.743263427072441 | bayes_pls_golite062009 |
