YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE22547

General Information:
Name(s) found: CE22547 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00021920 locus:mrps-25 Probable 28S ribosomal protein S25, mitochondrial status:Confirmed UniProt:Q9N361 protein_id:CCD74058.1 [WormBase]
  • gi|7332106|gb|AAF60793.1| Hypothetical protein Y55F3AM.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17543638|ref|NP_500032.1| hypothetical protein Y55F3AM.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|13633934|sp|Q9N361.1|RT25_CAEEL RecName: Full=Probable 28S ribosomal protein S25, mitochondrial; Short=S25mt; AltName: Full=MRP-S25 [NCBI NR]
  • Probable 28S ribosomal protein S25, mitochondrial OS=Caenorhabditis elegans GN=mrps-25 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE22547 WBGene00021920 status:Confirmed SW:Q9N361 protein_id:AAF60793.1 [wormpep150.fasta]
  • 22547 WBGene00021920 status:Confirmed SW:Q9N361 protein_id:AAF60793.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • mitochondrial ribosomal protein S25 (19.8 kD) (4B811) [Caenorhabditis elegans]gi|7332106|gb|AAF60793.1| Hypothetical protein Y55F3AM.1 [Caenorhabditis elegans]gi|13633934|sp|Q9N361|RT25_CAEEL Probable mitochondrial 28S ribosomal protein S25 (S25mt) (MRP [nrdb_11152004_Chlamydomonas]
  • status:Confirmed SW:Q9N361 protein_id:AAF60793.1 [wormpep115.fasta.reversed]
  • CE22547 status:Confirmed SW:Q9N361 protein_id:AAF60793.1 [wormpep80.hongbin]
  • CE22547 WBGene00021920 status:Confirmed UniProt:RT25_CAEEL protein_id:AAF60793.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22547 WBGene00021920 status:Confirmed UniProt:RT25_CAEEL protein_id:AAF60793.1| [wormORF-contam.fasta]
  • Y55F3AM.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y55F3AM.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Probable mitochondrial 28S ribosomal protein S25 (S25mt) (MRP-S25) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22547 WBGene00021920 status:Confirmed UniProt:Q9N361 protein_id:AAF60793.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22547 WBGene00021920 locus:mrps-25 status:Confirmed UniProt:Q9N361 protein_id:CCD74058.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE22547 WBGene00021920 locus:mrps-25 status:Confirmed UniProt:Q9N361 protein_id:CCD74058.1 Probable 28S ribosomal protein S25, mitochondrial [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 170 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFMHGSMPL RRTFFYLQQG KVKLRDNVNV FSMGFHKNPT PEQSGARDFV YWNWAQLQYH  60
   61 NPKVQLVKHA DKVVTPFARA YLNDGREVLF DLDGMKREEI EKLLAKTLGK TELVERREHL 120
  121 ESIAKLNPAD FGSKNERQCM CEVQGQHPCT GLLRAPQCVT GKYRWNHNLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] FFAS03 2.89 NMR Solution Structure of Subunit B8 from Human NADH-Ubiquinone Oxidoreductase Complex I (CI-B8)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.646676412582618 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.374519363311304 bayes_pls_golite062009
  • binding
    		•  0.310784153497749 bayes_pls_golite062009
  • protein binding
    		•  0.191955497059338 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle