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View Structure Prediction Details

Protein: CE22547
Organism: Caenorhabditis elegans
Length: 170 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22547.

Description E-value Query
Range
Subject
Range
gi|55234524, gi|... - gi|58393921|ref|XP_320391.2| ENSANGP00000014061 [Anopheles gambiae str. PEST], gi|55234524|gb|EAA004...
301.0 [0..1] [165..1]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFMHGSMPL RRTFFYLQQG KVKLRDNVNV FSMGFHKNPT PEQSGARDFV YWNWAQLQYH  60
   61 NPKVQLVKHA DKVVTPFARA YLNDGREVLF DLDGMKREEI EKLLAKTLGK TELVERREHL 120
  121 ESIAKLNPAD FGSKNERQCM CEVQGQHPCT GLLRAPQCVT GKYRWNHNLI 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.89
Match: 1s3aA
Description: NMR Solution Structure of Subunit B8 from Human NADH-Ubiquinone Oxidoreductase Complex I (CI-B8)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.646676412582618 bayes_pls_golite062009
transcription regulator activity 0.374519363311304 bayes_pls_golite062009
binding 0.310784153497749 bayes_pls_golite062009
protein binding 0.191955497059338 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle