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Protein Overview: CE20477

General Information:
Name(s) found: CE20477 [WormBase]
Description(s) found:
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  • WBGene00021220 status:Predicted UniProt:G5EDB5 protein_id:CCD64362.1 [WormBase]
  • pir||T33942 hypothetical protein C01B4.8 - Caenorhabditis elegans [NCBI NR]
  • gi|4262572|gb|AAD14700.1| Hypothetical protein C01B4.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|17557432|ref|NP_503682.1| hypothetical protein C01B4.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|145312330|gb|AAK68418.2|AC006722_10 Hypothetical protein Y19D10A.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|115534564|ref|NP_503656.2| hypothetical protein Y19D10A.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE20477 WBGene00015272 status:Predicted TR:Q9UAT4 protein_id:AAD14700.1 [wormpep150.fasta]
  • 20477 WBGene00015272 status:Predicted TR:Q9UAT4 protein_id:AAD14700.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • general substrate transporter family member (53.1 kD) (5C967) [Caenorhabditis elegans]gi|4262572|gb|AAD14700.1| Hypothetical protein C01B4.8 [Caenorhabditis elegans]gi|7495076|pir||T33942 hypothetical protein C01B4.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q9UAT4 protein_id:AAD14700.1 [wormpep115.fasta.reversed]
  • CE20477 status:Predicted TR:Q9UAT4 protein_id:AAD14700.1 [wormpep80.hongbin]
  • CE20477 WBGene00015272 status:Predicted UniProt:Q9UAT4_CAEEL protein_id:AAD14700.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE20477 WBGene00021220 status:Predicted UniProt:Q9UAT4_CAEEL protein_id:AAK68418.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE20477 WBGene00021220 status:Predicted UniProt:Q9UAT4_CAEEL protein_id:AAK68418.2| [wormORF-contam.fasta]
  • CE20477 WBGene00015272 status:Predicted UniProt:Q9UAT4_CAEEL protein_id:AAD14700.1| [wormORF-contam.fasta]
  • CE20477 WBGene00021220 status:Predicted TR:Q966D5 protein_id:AAK68418.1 [wormpep160-contam.fasta]
  • Hypothetical protein C01B4.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C01B4.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y19D10A.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE20477 WBGene00021220 status:Predicted TR:Q9UAT4 protein_id:AAK68418.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE20477 WBGene00021220 status:Predicted UniProt:Q9UAT4 protein_id:AAK68418.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE20477 WBGene00015272 status:Predicted UniProt:Q9UAT4 protein_id:AAD14700.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE20477 WBGene00015272 status:Predicted UniProt:G5EDB5 protein_id:CCD62291.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE20477 WBGene00021220 status:Predicted UniProt:G5EDB5 protein_id:CCD64362.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C01B4.8 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    glycerol-3-phosphate transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    phosphate transmembrane transporter activity [IEALink to PubMed article]
    glycerol-3-phosphate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVGDAEEK IEKSDEMSEN SRKTSKILCC NLTRYLILIL TLTCLTLLQM NSLAFNFTVI  60
   61 CMSDVSDDYH ITHPNETHWF EDSNMKSLVF SSMAVGGLLG LLIAMPLMHR VGVRLVLSIC 120
  121 GVFSILGTIL FPLAVEWNFF SVLVVRFLQG LGISMVFTVL GSVPTAWAPN NESGTFLAVL 180
  181 SCAFQWSNVI CMPISGFLCE SSWGWRSIYY LFGIVTIVFF LAFYFFYTDS PTDHRNVSNK 240
  241 ELSLILQDKT VTHKEPVPYL AICKDPCVLV TWMSNIGGNL GFLTLVLYGP TYLREVLNFE 300
  301 VRGTGFASAL PFLLSAAVKS IAGQLSDRCD FVSERVRFTI CGIVARLGLA IGYIGMATTS 360
  361 SRLVAQIAFT FSIAVSGLNI MGTVKCLQLR CKQHVHFAVS VIALMAYVIQ FGAPILVGII 420
  421 CPDNTAEQWG WFFLIVGIIV FVTSAPFPWF TTAEPADYTL SREKQLEIAK HKELQECC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..478] PSI-BLAST 45.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.78662033436109 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • binding
    		•  0.805286077372817 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle