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Protein Overview: CE20043

General Information:
Name(s) found: CE20043 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00020407 locus:chil-24 status:Partially_confirmed UniProt:Q9TZF2 protein_id:CCD73596.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 410 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDAGAKTK KHRRSEETQR WKVCRHCHEK QDSTFFSIHS NYKMSNNETE TTPSRIVGFY  60
   61 ADWERTDITS HQVAKLTHAV FAYVQMKFDG SLGFKNDAAR IRFSNLRDKV RRNEDSNVKM 120
  121 MISIGGFENS QHFYPVLSNV EMKKAFLNSI SSFLAYHELH GVDIFWKWPS PEDKAHYSRF 180
  181 LADLRQHLGY EFIISVAVPQ AEVSNLELGY DLRTISSHVD FFNVHSMDYY GPWPNEWGKP 240
  241 TGPISPLYGP TRHNVDWTLR YYAEKTGEPG KLNMVIPFFV RLWKNVPEPV EPGRQVFRDV 300
  301 ELVDNKPQGE AYMSRWSAQH EELDLSPADW DEETRSSYTW NPDTRNFVTF ETDKSIQEKM 360
  361 KYVKEKNLGG VWIWHVDANE KLLDSVRFDG EGVVDDQEYR EIGLDISSLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..410] PSI-BLAST 84.154902 Chitinase A, N-terminal domain N; Chitinase A, catalytic domain; Chitinase A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.271719737164788 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle