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View Structure Prediction Details

Protein: CE20043
Organism: Caenorhabditis elegans
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20043.

Description E-value Query
Range
Subject
Range
gi|109895306, gi... - gi|110431374|ref|NP_001036035.1| chitinase 7 [Tribolium castaneum], gi|109895306|gb|ABG47445.1| chit...
345.0 [0..9] [409..49]

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Predicted Domain #1
Region A:
Residues: [1-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDAGAKTK KHRRSEETQR WKVCRHCHEK QDSTFFSIHS NYKMSNNETE TTPSRIVGFY  60
   61 ADWERTDITS HQVAKLTHAV FAYVQMKFDG SLGFKNDAAR IRFSNLRDKV RRNEDSNVKM 120
  121 MISIGGFENS QHFYPVLSNV EMKKAFLNSI SSFLAYHELH GVDIFWKWPS PEDKAHYSRF 180
  181 LADLRQHLGY EFIISVAVPQ AEVSNLELGY DLRTISSHVD FFNVHSMDYY GPWPNEWGKP 240
  241 TGPISPLYGP TRHNVDWTLR YYAEKTGEPG KLNMVIPFFV RLWKNVPEPV EPGRQVFRDV 300
  301 ELVDNKPQGE AYMSRWSAQH EELDLSPADW DEETRSSYTW NPDTRNFVTF ETDKSIQEKM 360
  361 KYVKEKNLGG VWIWHVDANE KLLDSVRFDG EGVVDDQEYR EIGLDISSLS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.154902
Match: 1nh6A
Description: Chitinase A, N-terminal domain N; Chitinase A, catalytic domain; Chitinase A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.271719737164788 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle