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Protein Overview: CE19598

General Information:
Name(s) found: CE19598 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00020763 status:Partially_confirmed TR:Q9TZ31 protein_id:AAC68926.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 798 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSTSKSVE VNENSEEPIE LEENVIVVTG DEIQAEIAVV DGEEVIFADD DEYIEYDPLS  60
   61 IANDRNAVYD IYQPHESENG TFMCKICMRT GKNTEYEDRS TFVAHRYKCH GSFNNNVMCP 120
  121 LGDCREVFAS LYTLRRHLSQ QHELPIEIHL QSFVNIGEFE KFRHLVELAS GCRFMMHTKQ 180
  181 PKYRRQVMHC SKSEHKLVLQ TQKHRLPRER MLKEGSACPS VISYRVESSS GEVHTFMQLY 240
  241 HIGHAPDTES QNSNADNARP MDIVFPIKPA CWANHPMQYV QIDVHEMPTS IYGNKIYDNI 300
  301 LIVTCLKTRF LWAKPLFECT RTAIGRILNS IFNEYGVPEG FSTSFSPTYI RDTIKSLESV 360
  361 YAVEIREVWN EPLPYNCLER WVLELAQNEL GTRNRWVEQL QFLVMEYNQK PIPDRMETPF 420
  421 ERMFNRKAPN LYHNGDNQEI IHDKYISYHS ELRNEEEGVE NRLNTSFEPG RKVFLRKGIT 480
  481 KPRRGNNTQY YFGYIGEVDP SNPYYPFKVH YTSSDSPWPS ERNIYAWVSV FDLLPTIHEI 540
  541 SEMSMTSKKV SIAGLLCSCM GIESSQKYDL TAMGDIARES SRCLLFRNCL CTNQMSRFCC 600
  601 KLVGREHCRF HSVYPENDES YAKMDAALSS FIAYNKDSSK EAEKDLQDST PIEQILNEVG 660
  661 RRRLESEITV EDPEDLAPPI LEPMEPTERH LDTEEEEEEP NQIPMASEHI DIEGVDEEEI 720
  721 MEHSVNAISE EILFEYADDK RDDGPSTPKR GRRRKSPSES AGKKKKLSNN DEFVESTVSR 780
  781 RSSARRTIRP KNLDDYVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] MSA 4.48299 View MSA. No confident structure predictions are available.
    2 View Details [221..530] FFAS03 4.2 N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain
    3 View Details [531..671] MSA 7.414995 View MSA. No confident structure predictions are available.
    4 View Details [672..798] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.638749293464446 bayes_pls_golite062009
  • hydrolase activity
    		•  0.094903118031094 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle