General Information: |
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Name(s) found: |
CE19598
[WormBase]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Caenorhabditis elegans |
Length: | 798 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: | NONE FOUND |
Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MLPSTSKSVE VNENSEEPIE LEENVIVVTG DEIQAEIAVV DGEEVIFADD DEYIEYDPLS 60 61 IANDRNAVYD IYQPHESENG TFMCKICMRT GKNTEYEDRS TFVAHRYKCH GSFNNNVMCP 120 121 LGDCREVFAS LYTLRRHLSQ QHELPIEIHL QSFVNIGEFE KFRHLVELAS GCRFMMHTKQ 180 181 PKYRRQVMHC SKSEHKLVLQ TQKHRLPRER MLKEGSACPS VISYRVESSS GEVHTFMQLY 240 241 HIGHAPDTES QNSNADNARP MDIVFPIKPA CWANHPMQYV QIDVHEMPTS IYGNKIYDNI 300 301 LIVTCLKTRF LWAKPLFECT RTAIGRILNS IFNEYGVPEG FSTSFSPTYI RDTIKSLESV 360 361 YAVEIREVWN EPLPYNCLER WVLELAQNEL GTRNRWVEQL QFLVMEYNQK PIPDRMETPF 420 421 ERMFNRKAPN LYHNGDNQEI IHDKYISYHS ELRNEEEGVE NRLNTSFEPG RKVFLRKGIT 480 481 KPRRGNNTQY YFGYIGEVDP SNPYYPFKVH YTSSDSPWPS ERNIYAWVSV FDLLPTIHEI 540 541 SEMSMTSKKV SIAGLLCSCM GIESSQKYDL TAMGDIARES SRCLLFRNCL CTNQMSRFCC 600 601 KLVGREHCRF HSVYPENDES YAKMDAALSS FIAYNKDSSK EAEKDLQDST PIEQILNEVG 660 661 RRRLESEITV EDPEDLAPPI LEPMEPTERH LDTEEEEEEP NQIPMASEHI DIEGVDEEEI 720 721 MEHSVNAISE EILFEYADDK RDDGPSTPKR GRRRKSPSES AGKKKKLSNN DEFVESTVSR 780 781 RSSARRTIRP KNLDDYVE |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | hcp2 ip from december | Cheeseman, I.M., et al. (2005) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..220] | 4.48299 | View MSA. No confident structure predictions are available. | |
2 | View Details | [221..530] | 4.2 | N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain | |
3 | View Details | [531..671] | 7.414995 | View MSA. No confident structure predictions are available. | |
4 | View Details | [672..798] | N/A | No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||
1 | No functions predicted. | |||||||||
2 |
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3 | No functions predicted. | |||||||||
4 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)