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Protein Overview: CE19370

General Information:
Name(s) found: CE19370 [WormBase]
Description(s) found:
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  • WBGene00016550 status:Partially_confirmed UniProt:Q9TZA6 protein_id:CCD66468.1 [WormBase]
  • pir||T33592 hypothetical protein C40A11.7 - Caenorhabditis elegans [NCBI NR]
  • gi|3790703|gb|AAC68762.1| Hypothetical protein C40A11.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|17532349|ref|NP_494199.1| hypothetical protein C40A11.7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE19370 WBGene00016550 status:Partially_confirmed TR:Q9TZA6 protein_id:AAC68762.1 [wormpep150.fasta]
  • 19370 WBGene00016550 status:Partially_confirmed TR:Q9TZA6 protein_id:AAC68762.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • tumor necrosis factor protein like family member (2C438) [Caenorhabditis elegans]gi|3790703|gb|AAC68762.1| Hypothetical protein C40A11.7 [Caenorhabditis elegans]gi|7497243|pir||T33592 hypothetical protein C40A11.7 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9TZA6 protein_id:AAC68762.1 [wormpep115.fasta.reversed]
  • CE19370 status:Predicted TR:Q9TZA6 protein_id:AAC68762.1 [wormpep80.hongbin]
  • CE19370 WBGene00016550 status:Partially_confirmed UniProt:Q9TZA6_CAEEL protein_id:AAC68762.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE19370 WBGene00016550 status:Partially_confirmed UniProt:Q9TZA6_CAEEL protein_id:AAC68762.1| [wormORF-contam.fasta]
  • C40A11.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C40A11.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE19370 WBGene00016550 status:Partially_confirmed UniProt:Q9TZA6 protein_id:AAC68762.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE19370 WBGene00016550 status:Partially_confirmed UniProt:Q9TZA6 protein_id:CCD66468.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C40A11.7 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSSETIVKL NVGGSVFETW KSTLTKQDGF FKTLVETNIP VKKDTSDCYF IDRSPKYFET  60
   61 VLNYMRSGVT VLPDSEKELQ ELKKEAEFYL LEQLVDLCEP INNQIRTYRS SHELLQIIAS 120
  121 TKKPVVVINY ITHNNDIIYI PEGFRFDEFV KKNSSVVEIY FQPMDNREPL PKDLRRHRGM 180
  181 KYYPEPVWSY RIYNSTHSGC VDLTAMDDLQ KKIDSILNGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 30.522879 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle