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Protein Overview: CE19366

General Information:
Name(s) found: CE19366 [WormBase]
Description(s) found:
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  • WBGene00016546 status:Partially_confirmed UniProt:Q9TZA9 protein_id:AAC68765.1 [WormBase]
  • pir||T33589 hypothetical protein C40A11.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3790706|gb|AAC68765.1| Hypothetical protein C40A11.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|17532341|ref|NP_494196.1| hypothetical protein C40A11.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE19366 WBGene00016546 status:Predicted TR:Q9TZA9 protein_id:AAC68765.1 [wormpep150.fasta]
  • 19366 WBGene00016546 status:Predicted TR:Q9TZA9 protein_id:AAC68765.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • binding protein 1 like family member (2C433) [Caenorhabditis elegans]gi|3790706|gb|AAC68765.1| Hypothetical protein C40A11.3 [Caenorhabditis elegans]gi|7497239|pir||T33589 hypothetical protein C40A11.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q9TZA9 protein_id:AAC68765.1 [wormpep115.fasta.reversed]
  • CE19366 status:Predicted TR:Q9TZA9 protein_id:AAC68765.1 [wormpep80.hongbin]
  • CE19366 WBGene00016546 status:Predicted UniProt:Q9TZA9_CAEEL protein_id:AAC68765.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE19366 WBGene00016546 status:Predicted UniProt:Q9TZA9_CAEEL protein_id:AAC68765.1| [wormORF-contam.fasta]
  • Hypothetical protein C40A11.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C40A11.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE19366 WBGene00016546 status:Partially_confirmed UniProt:Q9TZA9 protein_id:AAC68765.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSPANIMML NIGGTVFHTS KATLTGINGF FKMLLESDIP LHKDESNCIF IDRSPKHFDV  60
   61 ILNFLRDGDV DLPELEKEVK EVRREAQFYL LDGLVYLCNW KLNTAIHVLK NDTEKLEFQR 120
  121 KNDKPRLLIK YGDINDVVEY WRLRFNIPEI LEKYGNKLHI AFHPYEEFTG FVDEFLAEIV 180
  181 ADSRDNEDDS ANSEGDSLIS LNKHYICSLS VFKHGSFVTL EKLMVLLGFN GGVDRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 21.522879 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [156..236] MSA 6.437996 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle