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Protein Overview: tpi-1

General Information:
Name(s) found: tpi-1 / CE19040 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00006601 locus:tpi-1 Triosephosphate isomerase status:Confirmed UniProt:Q10657 protein_id:CAA19447.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IDA]
    Biological Process: metabolic process [IEALink to PubMed article]
    Molecular Function: triose-phosphate isomerase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKFFVGGN WKMNGDYASV DGIVTFLNAS ADNSSVDVVV APPAPYLAYA KSKLKAGVLV  60
   61 AAQNCYKVPK GAFTGEISPA MIKDLGLEWV ILGHSERRHV FGESDALIAE KTVHALEAGI 120
  121 KVVFCIGEKL EEREAGHTKD VNFRQLQAIV DKGVSWENIV IAYEPVWAIG TGKTASGEQA 180
  181 QEVHEWIRAF LKEKVSPAVA DATRIIYGGS VTADNAAELG KKPDIDGFLV GGASLKPDFV 240
  241 KIINARS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 96.0 Triosephosphate isomerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • triose-phosphate isomerase activity
    		•  5.94525596131351 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  4.11751506069887 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  3.62219160185043 bayes_pls_golite062009
  • isomerase activity
    		•  2.06271139232842 bayes_pls_golite062009
  • binding
    		•  1.80264931081179 bayes_pls_golite062009
  • catalytic activity
    		•  1.7524198174984 bayes_pls_golite062009
  • protein binding
    		•  0.33788557654084 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle