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Protein Overview: atg-7

General Information:
Name(s) found: atg-7 / CE18887 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00010882 locus:atg-7 status:Confirmed UniProt:G5EBK4 protein_id:CAA92753.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 647 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: dauer larval development [IGILink to PubMed article]
    autophagy [IGILink to PubMed article]
    Mo-molybdopterin cofactor biosynthetic process [IEALink to PubMed article]
    meiosis [IMPLink to PubMed article]
    Molecular Function: ATPase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFVPFVTC LDTGFWNEVN KKKLNDWKLD ETPKCISSQL SLHQTEGFKC HLSLSYDSLS  60
   61 SLESTTGLSM SGTLLLYNTI ESFKMVDKSD LIRSEAEKIW ESITTRKWLQ NPRLLSQFFI 120
  121 IAFADLKKFK YYYWTCVPAL VYPSEIKQEI TPLSSLGADH KILFDFYRKN NFPIFLYSKQ 180
  181 SSKMLELSEL ENNTNPDEIC VVVADPSPVA YSAGWMVRNV LAAVAHLHPT WKHCHIISLR 240
  241 SADSIGIKYT WTLPSAECSA DGAQNAVPKA VGWERNANDK LQPISVDLSK EFDPKILMER 300
  301 SVDLNLSLIK WRLHPDIQLE RYSQLKVLIL GAGTLGCNIA RCLIGWGVRH ISFLDNSTVS 360
  361 YNNPVRQSLS EFEDARLGRG KAETAQAAIQ RIFPSIQATA HRLTVPMPGH SIDEKDVPEL 420
  421 EKDIAKLEQL VKDHDVVFLA LDSREARWLP TVLASRHKKI AISVAIGFDT YVIIRHGIGS 480
  481 RSESVSDVSS SDSVPYSQLS CYFCSDVTAP GNSTFDRTLD QQCTVARPGT SMIASGIAVE 540
  541 LLSSVLQYPD PLKTPASHDD NTTVLGAAPH QIRGFLGRFQ QILPSVKRFD QCVACGDAIA 600
  601 AQFQQNGWKF VRDVMNSPGR LEEVTGLDEL QNSVNAIDID FEDDEDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] MSA 1.044974 View MSA. No confident structure predictions are available.
    2 View Details [144..290] MSA 2.207995 View MSA. No confident structure predictions are available.
    3 View Details [291..647] PSI-BLAST 62.30103 Molybdenum cofactor biosynthesis protein MoeB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • small protein activating enzyme activity
    		•  3.58068602287881 bayes_pls_golite062009
  • NEDD8 activating enzyme activity
    		•  2.11391077579348 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  1.84216910649062 bayes_pls_golite062009
  • binding
    		•  1.66028321721112 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.54883560427918 bayes_pls_golite062009
  • protein binding
    		•  1.40907622346701 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.31244773198273 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.27535252106053 bayes_pls_golite062009
  • catalytic activity
    		•  1.22201444897049 bayes_pls_golite062009
  • transferase activity
    		•  0.680338489823338 bayes_pls_golite062009
  • URM1 activating enzyme activity
    		•  0.207228630005671 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle