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Protein Overview: CE18814

General Information:
Name(s) found: CE18814 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00010397 locus:suox-1 status:Confirmed UniProt:Q9XTQ8 protein_id:CAB17069.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 541 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    nitrate assimilation [IEALink to PubMed article]
    positive regulation of locomotion [IMPLink to PubMed article]
    Molecular Function: transition metal ion binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]
    molybdenum ion binding [IEALink to PubMed article]
    oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRGTSFNR FFRHRRQFNK LSGATSEHQR TNENHSYYKY AYIGGAATAG VLGFKHFVKT  60
   61 AKLDHAKDET MSEKKLENLQ IYKQEEVKKH GKDADRIWVT YKDGVYDVTD FIAMHPGGDK 120
  121 ILLAAGAAVD PFWALYSQHK TKEVLEILEG YRIGKLDVKD VPKPVADAFS NDPERHPALL 180
  181 VRNSKPFNAE TPPSLLTDHF YTPNELFFVR NHLPVPDIKT ENHRLTVETI KGKTVDLSVE 240
  241 ELKKKYKSYT IGSVIQCAGN RRADMNQYKK VQGLMWEGTA ISNAEWTGVR LRDLLADAGI 300
  301 DVFDDKIKHV HFEGADVDPT GTPYGASIPI EKARGDEVIV AYHMNGVDIP RDHGAPLRVI 360
  361 VPGNVGARQV KWLRKIIVSE KESDSHWQQK DYRAFSPAVN IGDELKWNTV PSIQEYPVQC 420
  421 AICSPAPNTK VDRGDETVDI SGYAWSGGGR GIIRIEVSVD GGETWNSVEM EQEEKQDQEH 480
  481 MYAWTLFKAE VKIPPGVKEF NIIAKAVDRA YNTQPETASG IWNVRGLIHN AWHRVPIIVK 540
  541 D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..541] PSI-BLAST 100.0 Sulfite oxidase, C-terminal domain; Sulfite oxidase, N-terminal domain; Sulfite oxidase, middle catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • sulfite oxidase activity
    		•  3.51337503004627 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, oxygen as acceptor
    		•  1.96064934018532 bayes_pls_golite062009
  • binding
    		•  1.13937274704645 bayes_pls_golite062009
  • molybdopterin cofactor binding
    		•  0.928574039561971 bayes_pls_golite062009
  • protein binding
    		•  0.268795825133297 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.203350317729126 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.203350317729126 bayes_pls_golite062009
  • hydrolase activity
    		•  0.157008651395982 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle