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View Structure Prediction Details

Protein: CE18814
Organism: Caenorhabditis elegans
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18814.

Description E-value Query
Range
Subject
Range
gi|157771790 - gi|157771790|ref|XP_001677715.1| Hypothetical protein CBG07713 [Caenorhabditis briggsae AF16]
gi|187033208, gi... - gi|39596703|emb|CAE63322.1| Hypothetical protein CBG07713 [Caenorhabditis briggsae], gi|187033208|em...
450.0 [0..1] [541..1]

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Predicted Domain #1
Region A:
Residues: [1-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRGTSFNR FFRHRRQFNK LSGATSEHQR TNENHSYYKY AYIGGAATAG VLGFKHFVKT  60
   61 AKLDHAKDET MSEKKLENLQ IYKQEEVKKH GKDADRIWVT YKDGVYDVTD FIAMHPGGDK 120
  121 ILLAAGAAVD PFWALYSQHK TKEVLEILEG YRIGKLDVKD VPKPVADAFS NDPERHPALL 180
  181 VRNSKPFNAE TPPSLLTDHF YTPNELFFVR NHLPVPDIKT ENHRLTVETI KGKTVDLSVE 240
  241 ELKKKYKSYT IGSVIQCAGN RRADMNQYKK VQGLMWEGTA ISNAEWTGVR LRDLLADAGI 300
  301 DVFDDKIKHV HFEGADVDPT GTPYGASIPI EKARGDEVIV AYHMNGVDIP RDHGAPLRVI 360
  361 VPGNVGARQV KWLRKIIVSE KESDSHWQQK DYRAFSPAVN IGDELKWNTV PSIQEYPVQC 420
  421 AICSPAPNTK VDRGDETVDI SGYAWSGGGR GIIRIEVSVD GGETWNSVEM EQEEKQDQEH 480
  481 MYAWTLFKAE VKIPPGVKEF NIIAKAVDRA YNTQPETASG IWNVRGLIHN AWHRVPIIVK 540
  541 D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1soxA
Description: Sulfite oxidase, C-terminal domain; Sulfite oxidase, N-terminal domain; Sulfite oxidase, middle catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
sulfite oxidase activity 3.51337503004627 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, oxygen as acceptor 1.96064934018532 bayes_pls_golite062009
binding 1.13937274704645 bayes_pls_golite062009
molybdopterin cofactor binding 0.928574039561971 bayes_pls_golite062009
protein binding 0.268795825133297 bayes_pls_golite062009
ligand-gated ion channel activity 0.203350317729126 bayes_pls_golite062009
ligand-gated channel activity 0.203350317729126 bayes_pls_golite062009
hydrolase activity 0.157008651395982 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle