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Protein Overview: fnta-1

General Information:
Name(s) found: fnta-1 / CE18099 [WormBase]
Description(s) found:
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  • WBGene00019823 locus:fnta-1 status:Confirmed UniProt:O44501 protein_id:CCD73169.1 [WormBase]
  • pir||T15061 hypothetical protein R02D3.5 - Caenorhabditis elegans [NCBI NR]
  • gi|2736325|gb|AAB94144.1| Hypothetical protein R02D3.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|17541746|ref|NP_499882.1| hypothetical protein R02D3.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE18099 WBGene00019823 farnesyltransferase alpha subunit status:Confirmed TR:O44501 protein_id:AAB94144.1 [wormpep150.fasta]
  • 18099 WBGene00019823 farnesyltransferase alpha subunit status:Confirmed TR:O44501 protein_id:AAB94144.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • farnesyltransferase (38.5 kD) (4A992) [Caenorhabditis elegans]gi|2736325|gb|AAB94144.1| Hypothetical protein R02D3.5 [Caenorhabditis elegans]gi|7506166|pir||T15061 hypothetical protein R02D3.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • farnesyltransferase alpha subunit status:Confirmed TR:O44501 protein_id:AAB94144.1 [wormpep115.fasta.reversed]
  • CE18099 farnesyltransferase alpha subunit status:Predicted TR:O44501 protein_id:AAB94144.1 [wormpep80.hongbin]
  • CE18099 WBGene00019823 farnesyltransferase alpha subunit status:Confirmed UniProt:O44501_CAEEL protein_id:AAB94144.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18099 WBGene00019823 farnesyltransferase alpha subunit status:Confirmed UniProt:O44501_CAEEL protein_id:AAB94144.1| [wormORF-contam.fasta]
  • Hypothetical protein R02D3.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • R02D3.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE18099 WBGene00019823 locus:fnta-1 farnesyltransferase alpha subunit status:Confirmed UniProt:O44501 protein_id:AAB94144.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE18099 WBGene00019823 locus:fnta-1 farnesyltransferase alpha subunit status:Confirmed UniProt:O44501_CAEEL protein_id:AAB94144.1 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE18099 WBGene00019823 locus:fnta-1 farnesyltransferase alpha subunit status:Confirmed UniProt:O44501 protein_id:CCD73169.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE18099 WBGene00019823 locus:fnta-1 status:Confirmed UniProt:O44501 protein_id:CCD73169.1 [wormpep246-ecoli-contam.fasta]
  • FarNesylTransferase, Alpha subunit OS=Caenorhabditis elegans GN=fnta-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    protein amino acid prenylation [IEALink to PubMed article]
    Molecular Function: protein prenyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSDIPSST LYKDNVDWKD ITPIYPSKEE EVAVKIAVTE DFTDAFAYFR AILIKNEKSD  60
   61 RVMALLEDCI RLNPANYTVW QYRRVCLTEL GWDLKKEMRY LSDIIQESPK NYQVWHHRRF 120
  121 IVETIGESAV NDELHFCSEV IRDENKNYHA WQHRQWVVRT FKVPLEKELT FALHMLLLDN 180
  181 RNNSAYNYRY FLMTLYDKTE DASQLDIEIN LAKKFIENIP NNESAWNYLA GLLITNGVTS 240
  241 NSDVVSFVED LYETTPEEKR SPFLLAFIAD MMLENIENQK SAEESAGRAK KLYKDLQSID 300
  301 PVRVNYYRHQ SLLAQTMLIK AQTKVTAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 37.0 Protein farnesyltransferase alpha-subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein geranylgeranyltransferase activity
    		•  12.6759732522795 bayes_pls_golite062009
  • protein farnesyltransferase activity
    		•  12.1496415778348 bayes_pls_golite062009
  • prenyltransferase activity
    		•  11.9861287863026 bayes_pls_golite062009
  • CAAX-protein geranylgeranyltransferase activity
    		•  10.4593287273566 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  8.98854711542899 bayes_pls_golite062009
  • Rab geranylgeranyltransferase activity
    		•  6.64922604670914 bayes_pls_golite062009
  • acetylcholine receptor regulator activity
    		•  2.46174453725203 bayes_pls_golite062009
  • transferase activity
    		•  1.86754243570948 bayes_pls_golite062009
  • binding
    		•  1.29714843812125 bayes_pls_golite062009
  • catalytic activity
    		•  0.874200184943744 bayes_pls_golite062009
  • protein binding
    		•  0.478870166958436 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle