| Protein: | fnta-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fnta-1.
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..3] | [328..1021] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MSDSDIPSST LYKDNVDWKD ITPIYPSKEE EVAVKIAVTE DFTDAFAYFR AILIKNEKSD 60
61 RVMALLEDCI RLNPANYTVW QYRRVCLTEL GWDLKKEMRY LSDIIQESPK NYQVWHHRRF 120
121 IVETIGESAV NDELHFCSEV IRDENKNYHA WQHRQWVVRT FKVPLEKELT FALHMLLLDN 180
181 RNNSAYNYRY FLMTLYDKTE DASQLDIEIN LAKKFIENIP NNESAWNYLA GLLITNGVTS 240
241 NSDVVSFVED LYETTPEEKR SPFLLAFIAD MMLENIENQK SAEESAGRAK KLYKDLQSID 300
301 PVRVNYYRHQ SLLAQTMLIK AQTKVTAK
|
| Detection Method: |  |
| Confidence: | 37.0 |
| Match: | 1o1rA |
| Description: | Protein farnesyltransferase alpha-subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein geranylgeranyltransferase activity | 12.6759732522795 | bayes_pls_golite062009 |
| protein farnesyltransferase activity | 12.1496415778348 | bayes_pls_golite062009 |
| prenyltransferase activity | 11.9861287863026 | bayes_pls_golite062009 |
| CAAX-protein geranylgeranyltransferase activity | 10.4593287273566 | bayes_pls_golite062009 |
| protein prenyltransferase activity | 8.98854711542899 | bayes_pls_golite062009 |
| Rab geranylgeranyltransferase activity | 6.64922604670914 | bayes_pls_golite062009 |
| acetylcholine receptor regulator activity | 2.46174453725203 | bayes_pls_golite062009 |
| transferase activity | 1.86754243570948 | bayes_pls_golite062009 |
| binding | 1.29714843812125 | bayes_pls_golite062009 |
| catalytic activity | 0.874200184943744 | bayes_pls_golite062009 |
| protein binding | 0.478870166958436 | bayes_pls_golite062009 |
