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Protein Overview: arx-7

General Information:
Name(s) found: arx-7 / CE18061 [WormBase]
Description(s) found:
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  • WBGene00000205 locus:arx-7 Actin-related protein 2\/3 complex subunit 5 status:Partially_confirmed UniProt:O61861 protein_id:CCD67363.1 [WormBase]
  • pir||T33169 hypothetical protein M01B12.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3158519|gb|AAC17561.1| Arp2/3 complex component protein 7 [Caenorhabditis elegans] [NCBI NR]
  • gi|17508293|ref|NP_491099.1| ARp2/3 compleX component family member (arx-7) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE18061 WBGene00000205 locus:arx-7 status:Partially_confirmed TR:O61861 protein_id:AAC17561.1 [wormpep150.fasta]
  • 18061 WBGene00000205 locus:arx-7 status:Partially_confirmed TR:O61861 protein_id:AAC17561.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • actin related protein 2 3 complex 16kDa, Actin Related protein 2/3 compleX component ARX-7 (arx-7) [Caenorhabditis elegans]gi|3158519|gb|AAC17561.1| Arp2/3 complex component protein 7 [Caenorhabditis elegans]gi|7505855|pir||T33169 hypothetical protein M [nrdb_11152004_Chlamydomonas]
  • locus:arx-7 status:Partially_confirmed TR:O61861 protein_id:AAC17561.1 [wormpep115.fasta.reversed]
  • CE18061 status:Partially_confirmed TR:O61861 protein_id:AAC17561.1 [wormpep80.hongbin]
  • CE18061 WBGene00000205 locus:arx-7 status:Partially_confirmed UniProt:O61861_CAEEL protein_id:AAC17561.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18061 WBGene00000205 locus:arx-7 status:Partially_confirmed UniProt:O61861_CAEEL protein_id:AAC17561.1| [wormORF-contam.fasta]
  • Arp2/3 complex component protein 7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • ARp2/3 compleX component family member (arx-7) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE18061 WBGene00000205 locus:arx-7 status:Partially_confirmed UniProt:O61861 protein_id:AAC17561.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE18061 WBGene00000205 locus:arx-7 status:Partially_confirmed UniProt:O61861 protein_id:CCD67363.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE18061 WBGene00000205 locus:arx-7 status:Partially_confirmed UniProt:O61861 protein_id:CCD67363.1 Actin-related protein 2\/3 complex subunit 5 [wormpep246-ecoli-contam.fasta]
  • Actin-related protein 2/3 complex subunit 5 OS=Caenorhabditis elegans GN=arx-7 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 152 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: regulation of actin filament polymerization [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNMQNTSY RKLDVDSFDP EQYDENDETV DTPGLGPDER AVQGFLSSNR LEDALHAALL  60
   61 SPPLKTKDQN VKDRATQLVT KVLQSFKNAE IEATVQKLSI EESDILMKYV YKSMEIGADA 120
  121 AVCQSLLAWH AQLVAKFGHG AIMRVFSGRQ RL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 62.69897 Arp2/3 complex 16 kDa subunit ARPC5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  4.05206194993572 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.8232927372914 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.81816151576197 bayes_pls_golite062009
  • binding
    		•  1.47072140214723 bayes_pls_golite062009
  • protein binding
    		•  0.727270535642847 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle