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Protein Overview: ham-1

General Information:
Name(s) found: ham-1 / CE17851 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00001820 locus:ham-1 status:Confirmed UniProt:G5EEC5 protein_id:CAA98132.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 414 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: neuron migration [IMPLink to PubMed article]
    asymmetric protein localization involved in cell fate determination [IMPLink to PubMed article]
    cell fate determination [IMPLink to PubMed article]
    Molecular Function: molecular_function [NDLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYLAVVLNG PKAKNGRKVF DSFLEQNRQM FWNRELTSAC ESITYMGFMR PGTLFVSGPA  60
   61 SQLTVLKDAW ARRILKPAMG YTITSLGDLG AIQQVEQMHF VPLGDVICDA VAQLNRQGLA 120
  121 ATEQAIRQYV ARHCPHVAPP GIEMVRQTIT SLLSTGFVYK MADHYFVSVP TNSPMRPPAK 180
  181 AATKTTKTTV ECQTGASMMC PQQTSTSSDE HVIEPAKKDH KKCQNSNRRS IFARLFSRGM 240
  241 KPQTIMPSAS PIHVGGPPTP PPAAMLPTKN KYPTYHHDLN EECQRKARRR NHPRRGETQK 300
  301 LLSSSSECLK YYPVDMPETR PTRRRARMAS PLRSSTPNNS DSAYSISPPH TDSNEEAGSI 360
  361 SDSEINHTYI NINKFRRQNF DSTQFEDLTG ATATTSEEPE ILGRHIRGVL ISNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] MSA 7.026978 View MSA. No confident structure predictions are available.
    2 View Details [99..224] MSA 3.024971 View MSA. No confident structure predictions are available.
    3 View Details [225..414] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle