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Protein Overview: ces-1

General Information:
Name(s) found: ces-1 / CE17821 [WormBase]
Description(s) found:
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  • WBGene00000468 locus:ces-1 status:Partially_confirmed UniProt:G5ECN8 protein_id:CAB02113.1 [WormBase]
  • pir||T22151 hypothetical protein F43G9.11 - Caenorhabditis elegans [NCBI NR]
  • gi|6017908|gb|AAF01678.1|AF169201_1 CES-1 [Caenorhabditis elegans] [NCBI NR]
  • gi|3877111|emb|CAB02113.1| C. elegans protein F43G9.11, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17507327|ref|NP_492338.1| CEll death Specification family member (ces-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE17821 WBGene00000468 locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed TR:Q93721 protein_id:CAB02113.1 [wormpep150.fasta]
  • 17821 WBGene00000468 locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed TR:Q93721 protein_id:CAB02113.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CEll death Specification CES-1, CES-1 (ces-1) [Caenorhabditis elegans]gi|3877111|emb|CAB02113.1| Hypothetical protein F43G9.11 [Caenorhabditis elegans]gi|6017908|gb|AAF01678.1| CES-1 [Caenorhabditis elegans]gi|7503332|pir||T22151 hypothetical protein F [nrdb_11152004_Chlamydomonas]
  • locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed TR:Q93721 protein_id:CAB02113.1 [wormpep115.fasta.reversed]
  • CE17821 Zinc finger, C2H2 type (5 domains) status:Predicted TR:Q93721 protein_id:CAB02113.1 [wormpep80.hongbin]
  • CE17821 WBGene00000468 locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed UniProt:Q93721_CAEEL protein_id:CAB02113.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE17821 WBGene00000468 locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed UniProt:Q93721_CAEEL protein_id:CAB02113.1| [wormORF-contam.fasta]
  • CES-1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F43G9.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CEll death Specification family member (ces-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE17821 WBGene00000468 locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed UniProt:Q93721 protein_id:CAB02113.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE17821 WBGene00000468 locus:ces-1 Zinc finger, C2H2 type (5 domains) status:Partially_confirmed UniProt:G5ECN8 protein_id:CAB02113.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE17821 WBGene00000468 locus:ces-1 status:Partially_confirmed UniProt:G5ECN8 protein_id:CAB02113.1 [wormpep246-ecoli-contam.fasta]
  • CES-1 OS=Caenorhabditis elegans GN=ces-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    intracellular [IEALink to PubMed article]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    negative regulation of programmed cell death [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    sequence-specific DNA binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTPNISLT PTVAPPVDFP IIGNCDFQAQ LWHLMSLHLQ MQKSSAASTS SSSSSSTSSE  60
   61 NLKKSPSSVQ NTSVFSIDNI LNSQKVPKLE LENDEDVSSS PSPTCSTTGY TLDSLQNLDR 120
  121 RSLNKKGPSS HNRCVCDKCG KSYATTSNLS RHKQTHRALD SPHAKQCPHC DRVYVSMPAL 180
  181 SMHILTHNAS HECNVCGKRF SRLWLLQGHL RSHTGLRPFS CAHCGKSFAD RSNLRAHMLT 240
  241 HTGDKRFECD KCGRRFALRA YLNRHLETCK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] PSI-BLAST 41.09691 No description for 2i13A was found.
    2 View Details [183..270] PSI-BLAST 16.30103 Ying-yang 1 (yy1, zinc finger domain)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle