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Protein Overview: hil-4

General Information:
Name(s) found: hil-4 / CE17421 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00001855 locus:hil-4 Histone H1.4 status:Confirmed UniProt:O17536 protein_id:CCD65228.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    nucleosome [IEALink to PubMed article]
    Biological Process: nucleosome assembly [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVAVAADT TETPAAPTKA SKATKASKAT KASKATKAKT TKVPMVKADA AHPPFINMVT  60
   61 EAISSIKDRK GPSRAAILKY ITTKYTLGDQ ANKINAHLRK ALNKGLESNA FVQASGNGAN 120
  121 GRFRLAEKTA SVAKSPAAAK KDATGEKKAT TTVAKKAATG EKKATTTVAK KAATGEKKAT 180
  181 TTVAKKAAAG DKAKKTEVKV KKVKSPKKIA KSPVNKVTKS PVKKIAKSSS MKAAPKKAAA 240
  241 KPAKKAPAAA PEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 8.0 Histone H5, globular domain
    2 View Details [128..253] FFAS03 1.77 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle