YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE17273

General Information:
Name(s) found: CE17273 [WormBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • WBGene00020993 Probable peptide chain release factor 1, mitochondrial status:Confirmed UniProt:O44568 protein_id:CCD65509.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: translational termination [IEALink to PubMed article]
    Molecular Function: translation release factor activity [IEALink to PubMed article]
    translation release factor activity, codon specific [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRHQQLLF RLIRQSVLHQ SSPTSSSASS TLLNSENGEK FVKTVVDRLA QCQAGNATAA  60
   61 PEQISYWESI SKQSAKVSDG RSELSQLRTI INDPKETEEM RKLAEVDVES IEENLETELQ 120
  121 ELAVKIVPLN NLDVLSKCQI ELSCGAGGQE AMLFTGELLD MYQKLAAVNS WKWDPLQVDN 180
  181 VPLGGVRSAL IAVSGEKVYA KMRFEAGVHR VQRVPVNDSR MHTSTASISV LPEPEEVSVV 240
  241 VPSDSVKIEA MRASGPGGQN VNKRSTAVRM THKETGIAVH CMDERFQHLN IQIAYKRLAA 300
  301 ILMQKQVDAM LEKIVSKRKL QVGSKARAEK IRTYNFQHDR VTDHRIQMSI TGVAEFLSAG 360
  361 ETLQTMIERL QEQHLEDRLD HIIENCIVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..389] PSI-BLAST 108.0 Molecular basis for bacterial class 1 release factor methylation by PrmC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation release factor activity
    		•  8.81340749100602 bayes_pls_golite062009
  • translation termination factor activity
    		•  8.79662142368955 bayes_pls_golite062009
  • translation regulator activity
    		•  4.37724037539958 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.37180094464794 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.32397225745616 bayes_pls_golite062009
  • binding
    		•  2.93072278766889 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle