YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE17273
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRHQQLLF RLIRQSVLHQ SSPTSSSASS TLLNSENGEK FVKTVVDRLA QCQAGNATAA  60
   61 PEQISYWESI SKQSAKVSDG RSELSQLRTI INDPKETEEM RKLAEVDVES IEENLETELQ 120
  121 ELAVKIVPLN NLDVLSKCQI ELSCGAGGQE AMLFTGELLD MYQKLAAVNS WKWDPLQVDN 180
  181 VPLGGVRSAL IAVSGEKVYA KMRFEAGVHR VQRVPVNDSR MHTSTASISV LPEPEEVSVV 240
  241 VPSDSVKIEA MRASGPGGQN VNKRSTAVRM THKETGIAVH CMDERFQHLN IQIAYKRLAA 300
  301 ILMQKQVDAM LEKIVSKRKL QVGSKARAEK IRTYNFQHDR VTDHRIQMSI TGVAEFLSAG 360
  361 ETLQTMIERL QEQHLEDRLD HIIENCIVE

Type	Start	End	Confidence
Signal Peptide	1	28	0.62
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	389	0.99