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Protein Overview: eri-1

General Information:
Name(s) found: eri-1 / CE17214 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00001332 locus:eri-1 3'-5' exonuclease eri-1 status:Partially_confirmed UniProt:O44406 protein_id:CCD73975.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: reproductive process in a multicellular organism [IMPLink to PubMed article]
    meiotic chromosome segregation [IMPLink to PubMed article]
    RNA interference [IMPLink to PubMed article]
    RNA catabolic process [IDALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article][ISSLink to PubMed article]
    3'-5'-exoribonuclease activity [IDALink to PubMed article]
    exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADEPSPED EKYLESLRDL LKISQEFDAS NAKQNDEPEK TAVEVESAET RTDESEKSID  60
   61 IPREQQLLPS ERVEPLKSMV EPEYVKKVIR QMDTMTAEQL KQALMKIKVS TGGNKKTLRK 120
  121 RVAQYYRKEN ALLNRKMEPN ADKTARFFDY LIAIDFECTC VEIIYDYPHE IIELPAVLID 180
  181 VREMKIISEF RTYVRPVRNP KLSEFCMQFT KIAQETVDAA PYFREALQRL YTWMRKFNLG 240
  241 QKNSRFAFVT DGPHDMWKFM QFQCLLSNIR MPHMFRSFIN IKKTFKEKFN GLIKGNGKSG 300
  301 IENMLERLDL SFVGNKHSGL DDATNIAAIA IQMMKLKIEL RINQKCSYKE NQRSAARKDE 360
  361 ERELEDAANV DLTSVDISRR DFQLWMRRLP LKLSSVTRRE FINEEYLDCD SCDDLTDDKV 420
  421 KHLHSCDIYE IFDEKTSASF TDSKCLIC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 47.69897 No description for 1zbuA was found.
    2 View Details [351..448] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle