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Protein Overview: crn-2

General Information:
Name(s) found: crn-2 / CE16950 [WormBase]
Description(s) found:
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  • WBGene00000795 locus:crn-2 status:Confirmed UniProt:G5EG18 protein_id:CCD65117.1 [WormBase]
  • pir||T32529 hypothetical protein CD4.2 - Caenorhabditis elegans [NCBI NR]
  • gi|31747253|gb|AAP57298.1| cell death-related nuclease 2 [Caenorhabditis elegans] [NCBI NR]
  • gi|2662576|gb|AAB88340.1| Cell-death-related nuclease protein 2 [Caenorhabditis elegans] [NCBI NR]
  • gi|17559024|ref|NP_504476.1| Cell-death-Related Nuclease family member (crn-2) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE16950 WBGene00000795 locus:crn-2 status:Confirmed TR:O44160 protein_id:AAB88340.1 [wormpep150.fasta]
  • 16950 WBGene00000795 locus:crn-2 status:Confirmed TR:O44160 protein_id:AAB88340.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • type V secretory pathway protein (31.7 kD) (5G75) [Caenorhabditis elegans]gi|31747253|gb|AAP57298.1| cell death-related nuclease 2 [Caenorhabditis elegans]gi|2662576|gb|AAB88340.1| Cell-death-related nuclease protein 2 [Caenorhabditis elegans]gi|749804 [nrdb_11152004_Chlamydomonas]
  • locus:crn-2 status:Confirmed TR:O44160 protein_id:AAB88340.1 [wormpep115.fasta.reversed]
  • CE16950 status:Partially_confirmed TR:O44160 protein_id:AAB88340.1 [wormpep80.hongbin]
  • CE16950 WBGene00000795 locus:crn-2 status:Confirmed UniProt:O44160_CAEEL protein_id:AAB88340.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE16950 WBGene00000795 locus:crn-2 status:Confirmed UniProt:O44160_CAEEL protein_id:AAB88340.1| [wormORF-contam.fasta]
  • cell death-related nuclease 2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cell-death-Related Nuclease family member (crn-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cell-death-related nuclease protein 2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE16950 WBGene00000795 locus:crn-2 status:Confirmed UniProt:O44160 protein_id:AAB88340.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE16950 WBGene00000795 locus:crn-2 status:Confirmed UniProt:G5EG18 protein_id:CCD65117.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Cell death-related nuclease 2 OS=Caenorhabditis elegans GN=crn-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA fragmentation involved in apoptosis [IDALink to PubMed article][IGILink to PubMed article]
    apoptotic cell clearance [IMPLink to PubMed article]
    Molecular Function: deoxyribonuclease activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALYELVDIG ANLGHPSYQK DLNDVLDRAK QAGLSKIMVT GTSEKISHEC ADLVEKYPGF  60
   61 LYFTAGVHPH DAKDWNDGTL EALKKLQENP SCVAVGECGL DFNRNFSPQD VQKEVFAKQV 120
  121 DMAVKLQKPL FIHEREAHED MVKILTAAGP SLPPAVIHCF TGTVVEAKKY LEMGFYIGLT 180
  181 GFLWKDRSDN GVQAGLRSGE IPIEKLVLET DAPYMYPKIN DKKIPKEIKS LITPETEALH 240
  241 NFSSFNRNEP CSLAAVCELV AAFAGRDPKE VAKITTENAK KVYKLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 77.39794 No description for 2gzxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle