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Protein Overview: CE16887

General Information:
Name(s) found: CE16887 [WormBase]
Description(s) found:
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  • WBGene00016266 locus:idhg-2 status:Confirmed UniProt:Q95YD8 protein_id:CCD66235.1 [WormBase]
  • gi|17505779|ref|NP_491989.1| hypothetical protein C30F12.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|15150646|gb|AAK85453.1|AC006610_7 Hypothetical protein C30F12.7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE16887 WBGene00016266 isocitrate dehydrogenase status:Partially_confirmed TR:Q95YD8 protein_id:AAK85453.1 [wormpep150.fasta]
  • 16887 WBGene00016266 isocitrate dehydrogenase status:Partially_confirmed TR:Q95YD8 protein_id:AAK85453.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • isocitrate dehydrogenase (1H553) [Caenorhabditis elegans]gi|15150646|gb|AAK85453.1| Hypothetical protein C30F12.7 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • isocitrate dehydrogenase status:Partially_confirmed TR:Q95YD8 protein_id:AAK85453.1 [wormpep115.fasta.reversed]
  • CE16887 isocitrate dehydrogenase status:Partially_confirmed TR:Q95YD8 protein_id:AAK85453.1 [wormpep80.hongbin]
  • CE16887 WBGene00016266 isocitrate dehydrogenase status:Confirmed UniProt:Q95YD8_CAEEL protein_id:AAK85453.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE16887 WBGene00016266 isocitrate dehydrogenase status:Confirmed UniProt:Q95YD8_CAEEL protein_id:AAK85453.1| [wormORF-contam.fasta]
  • C30F12.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C30F12.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE16887 WBGene00016266 isocitrate dehydrogenase status:Confirmed TR:Q95YD8 protein_id:AAK85453.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE16887 WBGene00016266 isocitrate dehydrogenase status:Confirmed UniProt:Q95YD8 protein_id:AAK85453.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE16887 WBGene00016266 locus:idhg-2 isocitrate dehydrogenase status:Confirmed UniProt:Q95YD8 protein_id:CCD66235.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE16887 WBGene00016266 locus:idhg-2 status:Confirmed UniProt:Q95YD8 protein_id:CCD66235.1 [wormpep246-ecoli-contam.fasta]
  • CE16887 WBGene00016266 locus:idhg-2 status:Confirmed UniProt:Q95YD8 protein_id:CCD66235.1 Isocitrate dehydrogenase [NAD] subunit, mitochondrial [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Caenorhabditis elegans GN=idhg-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 373 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    mitochondrion [IEALink to PubMed article]
    Biological Process: metabolic process [IEALink to PubMed article]
    leucine biosynthetic process [IEALink to PubMed article]
    tricarboxylic acid cycle [IEALink to PubMed article]
    Molecular Function: isocitrate dehydrogenase (NAD+) activity [IEALink to PubMed article]
    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    isocitrate dehydrogenase (NADP+) activity [IEALink to PubMed article]
    tartrate dehydrogenase activity [IEALink to PubMed article]
    3-isopropylmalate dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSKLPIQAV RGAASAIRTH QIPGHRLPLA KYGGRHTVCA LPGDGIGPEM IAHIRNIFSF  60
   61 CHAPVNFEEV QVSSSLLDGD MDAAMLAIER NGVAIKGNIE TKHDDPQFNS RNVELRTKLD 120
  121 LYANILHCVT IPTVPTRHSG IDIVLIRENT EGEYSGLEHE AVPGIVESIK IVTREKIERI 180
  181 SRMAFEYAKA NGRKKVTAVH KANIQKLGDG LFLKVVRDMS EDYKDIKFEA MIVDNASMQL 240
  241 VSKPQQFDVM VMPNLYGNII SNIACGLVGG PGLVSGMNLG DKYAVFETGT RNTGTSLAGK 300
  301 DIANPTAFIR ASVDMLRYLG CHYHANIISD ALWKALVEQR IHTADIGGNN SASDVINATL 360
  361 QNIKVLMDEN PKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..373] PSI-BLAST 101.0 No description for 2d1cA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle