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Protein Overview: sra-39

General Information:
Name(s) found: sra-39 / CE16438 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00005065 locus:sra-39 Serpentine receptor class alpha-39 status:Partially_confirmed UniProt:O62420 protein_id:CAB01772.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGCETRGQL YYHPAYLFAI IFQGTSGYLT FPILFIILKK YAFKVYYHPN LVFLMMLNVV  60
   61 SCLLLGGLTA WSATNFFLNL MIKPSPCDLL LKTYFCSKIR GTFLFAFCLV TTSHAGILLE 120
  121 RSWATYSVKN YERQGRALGT ILAIVAVAVA ATAIFILLLP EDGEEMITTC LTFSASKSIG 180
  181 SRVYVMFFVQ LLLDAVISIV HLVLYRYNKN IDKHGSTSLS EQFQRNENVK TLKQVTPLLI 240
  241 LSNVTIGVYI FIVSVFRLYK DYLPPNWYEI IAANLFIMPH MPFMFTSLIL VELWLGKKRQ 300
  301 DRIHKDMMAS QDVPLDDQFH IAMENWDVHF QSRLKAQARA NRKPLSANWT SSTLITKFKK 360
  361 RQTTVAVISI PPSPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..375] PSI-BLAST 46.045757 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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