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Protein Overview: nhr-102

General Information:
Name(s) found: nhr-102 / CE16356 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00003692 locus:nhr-102 status:Confirmed UniProt:Q9XVJ1 protein_id:CAB03298.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 414 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    steroid hormone receptor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTPSTSDT SSETSTSPAS TAICKVCGLC AHGLHFGVLA CRACAAFFRR TVVMERQKKY  60
   61 KCRGGEDNCA VSSTDRYQCR LCRFNKCVEL GMTPENVQWN RDSIPTSRKR KDDGPIVPAN 120
  121 DLKAMAYPDG SLFGKPRTIM DISTLSAKIK NILNEDKGGI DPATKKMNTL EIADYALRKW 180
  181 RNLQRSEEKM EKLDKLPVRQ MFAIFEKQMI VVAEWLVQNP DFRLLSLEER YIYFKAMWNM 240
  241 WRRFERFEMS VKMFGNDVVE IRKFAISNDQ ILTKEFTIDF SEITDVPNTT VQEMFRHSMS 300
  301 KMHHQVAKPL LELRPSSIET AYMLTQMSWQ VAGKKMQGKV VEIGERVCDE LANNLHSYYL 360
  361 KEEMRSNYAG RLVRLMSVVN SVKKIHMERS MTMELARIFE VFKVDFSEPD IFDC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 18.39794 Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
    2 View Details [110..414] PSI-BLAST 30.045757 hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle