| Protein: | nhr-102 |
| Organism: | Caenorhabditis elegans |
| Length: | 414 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-102.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..12] | [413..100] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MSSTPSTSDT SSETSTSPAS TAICKVCGLC AHGLHFGVLA CRACAAFFRR TVVMERQKKY 60
61 KCRGGEDNCA VSSTDRYQCR LCRFNKCVEL GMTPENVQWN RDSIPTSRK
|
| Detection Method: |  |
| Confidence: | 18.39794 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [110-414] |
1 11 21 31 41 51
| | | | | |
1 RKDDGPIVPA NDLKAMAYPD GSLFGKPRTI MDISTLSAKI KNILNEDKGG IDPATKKMNT 60
61 LEIADYALRK WRNLQRSEEK MEKLDKLPVR QMFAIFEKQM IVVAEWLVQN PDFRLLSLEE 120
121 RYIYFKAMWN MWRRFERFEM SVKMFGNDVV EIRKFAISND QILTKEFTID FSEITDVPNT 180
181 TVQEMFRHSM SKMHHQVAKP LLELRPSSIE TAYMLTQMSW QVAGKKMQGK VVEIGERVCD 240
241 ELANNLHSYY LKEEMRSNYA GRLVRLMSVV NSVKKIHMER SMTMELARIF EVFKVDFSEP 300
301 DIFDC
|
| Detection Method: | |
| Confidence: | 30.045757 |
| Match: | 1z5xE |
| Description: | hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A |
Matching Structure (courtesy of the PDB): |
|
