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Protein Overview: atp-5

General Information:
Name(s) found: atp-5 / CE15602 [WormBase]
Description(s) found:
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  • WBGene00007385 locus:atp-5 status:Confirmed UniProt:Q17763 protein_id:CAA99772.1 [WormBase]
  • pir||T19026 hypothetical protein C06H2.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3874042|emb|CAA99772.1| C. elegans protein C06H2.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17557712|ref|NP_505829.1| ATP synthase subunit family member (atp-5) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE15602 WBGene00007385 locus:atp-5 ATP synthase D chain status:Confirmed TR:Q17763 protein_id:CAA99772.1 [wormpep150.fasta]
  • 15602 WBGene00007385 ATP synthase D chain status:Confirmed TR:Q17763 protein_id:CAA99772.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ATP synthase like (21.8 kD) (5L602) [Caenorhabditis elegans]gi|3874042|emb|CAA99772.1| Hypothetical protein C06H2.1 [Caenorhabditis elegans]gi|7495575|pir||T19026 hypothetical protein C06H2.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE15602 WBGene00007385 ATP synthase D chain status:Confirmed TR:Q17763 protein_id:CAA99772.1 [wormpep132.fasta]
  • 15602 WBGene00007385 locus:atp-5 ATP synthase D chain status:Confirmed TR:Q17763 protein_id:CAA99772.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • ATP synthase D chain status:Confirmed TR:Q17763 protein_id:CAA99772.1 [wormpep115.fasta.reversed]
  • CE15602 ATP synthase D chain status:Confirmed TR:Q17763 protein_id:CAA99772.1 [wormpep80.hongbin]
  • CE15602 WBGene00007385 locus:atp-5 ATP synthase D chain status:Confirmed UniProt:Q17763_CAEEL protein_id:CAA99772.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE15602 WBGene00007385 locus:atp-5 ATP synthase D chain status:Confirmed UniProt:Q17763_CAEEL protein_id:CAA99772.1| [wormORF-contam.fasta]
  • Hypothetical protein C06H2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • ATP synthase subunit family member (atp-5) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE15602 WBGene00007385 locus:atp-5 ATP synthase D chain status:Confirmed UniProt:Q17763 protein_id:CAA99772.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE15602 WBGene00007385 locus:atp-5 status:Confirmed UniProt:Q17763 protein_id:CAA99772.1 [wormpep246-ecoli-contam.fasta]
  • ATP synthase subunit OS=Caenorhabditis elegans GN=atp-5 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    ATP synthesis coupled proton transport [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: proton-transporting ATPase activity, rotational mechanism [IEALink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAAKRVAT SSVNWSKLAE RLVPEHAAEL TRVKGVSGTF QSAVSQLPAD LPKIDFAALK  60
   61 KALPAHSAVL DSLQKQYESV KIPYGEVPAE YLKEVDQWVD YNNARIKLHE VKVADGLQEA 120
  121 KKVEEKWAKA PPVEHFDRQH FVEYFPAHFY DLRYQNRIPD PCNIGLNETP EIENRFKDYK 180
  181 VLRRADKVDD H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] PSI-BLAST 55.30103 No description for 2clyB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle