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Protein Overview: paf-1

General Information:
Name(s) found: paf-1 / CE14564 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00003906 locus:paf-1 status:Confirmed UniProt:G5EGT1 protein_id:CCD70130.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: 1-alkyl-2-acetylglycerophosphocholine esterase complex [IEALink to PubMed article]
    Biological Process: lipid catabolic process [IEALink to PubMed article]
    Molecular Function: 1-alkyl-2-acetylglycerophosphocholine esterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGYLSSPQI LTRKMPGQFK VGCMDLMIEE AAGSGLFMRL FFPTDSEITG PSSLPVWIPR  60
   61 PEYAYGVGEY LGHSPHQMDL ISSLVIGDKR VDCIDNAQLS TKSDKWPVLV FSHGLGGSRT 120
  121 FYSTYCTSLA SHGYVVAAVE HRDSSACWTY KLVEKNGTLV EKPMKIKLVD RNDKDQFKIR 180
  181 NEQVGKRAEE CAKAVKILEQ LDSGNVKDKV IIGNNANLEF FKNKLLTTTA SIIGHSFGGA 240
  241 TSIASSSSDF QKAIVLDGWM YPLDQNQQEQ AKQPIMFLNV GDWQWNENLE VMRKILPNNE 300
  301 GNILLTLSGA VHQSFTDFPF VFPNWLAKQF GVHGPTEPYL CMQSAIELTL SFLKDGKDGV 360
  361 QKLKDEKYTT FITNEIYGRV KLIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] PSI-BLAST 24.30103 No description for 2hu8A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.75934962198703 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.09488027320166 bayes_pls_golite062009
  • phospholipase activity
    		•  1.05835015160042 bayes_pls_golite062009
  • binding
    		•  0.978846093152455 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle