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View Structure Prediction Details

Protein: paf-1
Organism: Caenorhabditis elegans
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for paf-1.

Description E-value Query
Range
Subject
Range
paf-2 - status:Confirmed UniProt:Q22943 protein_id:AAL65779.1
261.0 [0..1] [382..1]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGYLSSPQI LTRKMPGQFK VGCMDLMIEE AAGSGLFMRL FFPTDSEITG PSSLPVWIPR  60
   61 PEYAYGVGEY LGHSPHQMDL ISSLVIGDKR VDCIDNAQLS TKSDKWPVLV FSHGLGGSRT 120
  121 FYSTYCTSLA SHGYVVAAVE HRDSSACWTY KLVEKNGTLV EKPMKIKLVD RNDKDQFKIR 180
  181 NEQVGKRAEE CAKAVKILEQ LDSGNVKDKV IIGNNANLEF FKNKLLTTTA SIIGHSFGGA 240
  241 TSIASSSSDF QKAIVLDGWM YPLDQNQQEQ AKQPIMFLNV GDWQWNENLE VMRKILPNNE 300
  301 GNILLTLSGA VHQSFTDFPF VFPNWLAKQF GVHGPTEPYL CMQSAIELTL SFLKDGKDGV 360
  361 QKLKDEKYTT FITNEIYGRV KLIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2hu8A
Description: No description for 2hu8A was found.

Predicted functions:

Term Confidence Notes
hydrolase activity 1.75934962198703 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.09488027320166 bayes_pls_golite062009
phospholipase activity 1.05835015160042 bayes_pls_golite062009
binding 0.978846093152455 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle