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Protein Overview: CE14418

General Information:
Name(s) found: CE14418 [WormBase]
Description(s) found:
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  • WBGene00020931 locus:cytb-5.2 status:Confirmed UniProt:O01816 protein_id:CCD68984.1 [WormBase]
  • pir||T15210 probable cytochrome b5 W02D3.1 [similarity] - Caenorhabditis elegans [NCBI NR]
  • gi|17509473|ref|NP_491931.1| hypothetical protein W02D3.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|13384553|gb|AAK21480.1| Hypothetical protein W02D3.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE14418 WBGene00020931 cytochrome B5 status:Confirmed TR:O01816 protein_id:AAK21480.1 [wormpep150.fasta]
  • 14418 WBGene00020931 cytochrome B5 status:Confirmed TR:O01816 protein_id:AAK21480.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cytochrome b5 (15.6 kD) (1H317) [Caenorhabditis elegans]gi|13384553|gb|AAK21480.1| Hypothetical protein W02D3.1 [Caenorhabditis elegans]gi|7430588|pir||T15210 probable cytochrome b5 W02D3.1 [similarity] - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • cytochrome B5 status:Confirmed TR:O01816 protein_id:AAK21480.1 [wormpep115.fasta.reversed]
  • CE14418 cytochrome B5 status:Confirmed TR:O01816 protein_id:AAK21480.1 [wormpep80.hongbin]
  • CE14418 WBGene00020931 cytochrome B5 status:Confirmed UniProt:O01816_CAEEL protein_id:AAK21480.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE14418 WBGene00020931 cytochrome B5 status:Confirmed UniProt:O01816_CAEEL protein_id:AAK21480.1| [wormORF-contam.fasta]
  • W02D3.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein W02D3.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE14418 WBGene00020931 cytochrome B5 status:Confirmed UniProt:O01816 protein_id:AAK21480.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE14418 WBGene00020931 locus:cytb-5.2 cytochrome B5 status:Confirmed UniProt:O01816 protein_id:CCD68984.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE14418 WBGene00020931 locus:cytb-5.2 status:Confirmed UniProt:O01816 protein_id:CCD68984.1 [wormpep246-ecoli-contam.fasta]
  • YTochrome B OS=Caenorhabditis elegans GN=cytb-5.2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 141 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: transition metal ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELRVISLD EVSKHNWEDA DQSCWIVISG KVYDVTKFLN EHPGGEEVIT QLAGKDATVG  60
   61 FLDVGHSKDA IEMANEYLIG QLPESDVPKV ETAAAKPSKN EKSSSLLNDF TEIMTSPTWT 120
  121 NFLIPTTMGL VIYAVYKCMF N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] PSI-BLAST 25.69897 No description for 2i96A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle