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Protein Overview: CE13976

General Information:
Name(s) found: CE13976 [WormBase]
Description(s) found:
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  • WBGene00020698 status:Partially_confirmed UniProt:Q94305 protein_id:CCD70904.1 [WormBase]
  • pir||T30983 hypothetical protein T22F3.8 - Caenorhabditis elegans [NCBI NR]
  • gi|17564558|ref|NP_504013.1| hypothetical protein T22F3.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|1658346|gb|AAB18311.1| Hypothetical protein T22F3.8 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE13976 WBGene00020698 status:Partially_confirmed TR:Q94305 protein_id:AAB18311.1 [wormpep150.fasta]
  • 13976 WBGene00020698 status:Partially_confirmed TR:Q94305 protein_id:AAB18311.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • general substrate transporter family member (5E82) [Caenorhabditis elegans]gi|1658346|gb|AAB18311.1| Hypothetical protein T22F3.8 [Caenorhabditis elegans]gi|7508236|pir||T30983 hypothetical protein T22F3.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q94305 protein_id:AAB18311.1 [wormpep115.fasta.reversed]
  • CE13976 status:Partially_confirmed TR:Q94305 protein_id:AAB18311.1 [wormpep80.hongbin]
  • CE13976 WBGene00020698 status:Partially_confirmed UniProt:Q94305_CAEEL protein_id:AAB18311.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13976 WBGene00020698 status:Partially_confirmed UniProt:Q94305_CAEEL protein_id:AAB18311.1| [wormORF-contam.fasta]
  • T22F3.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T22F3.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE13976 WBGene00020698 status:Partially_confirmed UniProt:Q94305 protein_id:AAB18311.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13976 WBGene00020698 status:Partially_confirmed UniProt:Q94305 protein_id:CCD70904.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T22F3.8 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    phosphate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIQTLFTLH CLYRTFFNLK VAFFLGSAGL TMMLLNNYYR FIVLLVGFLC LASLCSNYLI  60
   61 INFTFICMKH DFSDGFTEIN GTRQSIYDYT PDDKKWILWA VAAGTIIGTV PMNLLLVKYG 120
  121 ARFPFFLSGI VSCISTSLIP FAAKWNFAFL IILRFIQGFS FSADFAAIGL LAVRWAPLAE 180
  181 TAIFVAVLTC FNAIASMITN MATGLICVSS LGWKWSYYLH SIVGAILFVL WYFVYIDHPQ 240
  241 DTRRVSGKEL QSIQKNKSEA HLSKKCDVPY IKLATSPVIL CVWANAFFDL TAAIMFSTYI 300
  301 PLYLHEVLKF GVTETGFYSS LIHGICLPVR LCFGIISDKI QFISEPVKIQ IFNTISVGGS 360
  361 GLFFASIGLI PMEYRGWSVF SCIMTMSCIG VNPGGFYKVA VLHSRQFAHV VLTAIQWIKC 420
  421 LALFVAPALV SIFVTNESIR QQWIWVFLIV GGGMVITNIL GFFFLTDKPA EWTDTDEPLE 480
  481 KL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..482] PSI-BLAST 44.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.33121027955345 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.78662033436109 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • binding
    		•  0.805286077372817 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle