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Protein Overview: CE13668

General Information:
Name(s) found: CE13668 [WormBase]
Description(s) found:
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  • WBGene00020524 locus:dmsr-13 status:Partially_confirmed UniProt:O17030 protein_id:CCD68164.1 [WormBase]
  • pir||T32242 hypothetical protein T15B7.12 - Caenorhabditis elegans [NCBI NR]
  • gi|2384946|gb|AAB69965.1| Hypothetical protein T15B7.12 [Caenorhabditis elegans] [NCBI NR]
  • gi|17564324|ref|NP_504730.1| hypothetical protein T15B7.12 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE13668 WBGene00020524 status:Partially_confirmed TR:O17030 protein_id:AAB69965.1 [wormpep150.fasta]
  • 13668 WBGene00020524 status:Partially_confirmed TR:O17030 protein_id:AAB69965.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member, with at least 6 transmembrane domains, of bilaterial origin (5H298) [Caenorhabditis elegans]gi|2384946|gb|AAB69965.1| Hypothetical protein T15B7.12 [Caenorhabditis elegans]gi|7507853|pir||T32242 hypothetical protein T15B7 [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:O17030 protein_id:AAB69965.1 [wormpep115.fasta.reversed]
  • CE13668 status:Predicted TR:O17030 protein_id:AAB69965.1 [wormpep80.hongbin]
  • CE13668 WBGene00020524 status:Partially_confirmed UniProt:O17030_CAEEL protein_id:AAB69965.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13668 WBGene00020524 status:Partially_confirmed UniProt:O17030_CAEEL protein_id:AAB69965.1| [wormORF-contam.fasta]
  • T15B7.12 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T15B7.12 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE13668 WBGene00020524 status:Partially_confirmed UniProt:O17030 protein_id:AAB69965.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13668 WBGene00020524 locus:dmsr-13 status:Partially_confirmed UniProt:O17030 protein_id:CCD68164.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • DroMyoSuppressin Receptor related OS=Caenorhabditis elegans GN=dmsr-13 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASALNCTQF TVPYPEPGTD EVGNSTIPWL ITTVVKAYRP FHYYILTFLV VFAFFANIMI  60
   61 VKVLSHKEMI RSGVNVTMLL IAVCDFGCSI AGLLQLFLRS YSDNYTSYPT AYGQIAVDYL 120
  121 AVAFHASSLY LAVGMAFCRV KSLNIANRNK DLWQSPNYAV RVACALCAPV FLIATFVLFI 180
  181 NAVKNTEEEG IYLDISDLSL LSECLFMKAS LMASGLCFKI APCLLMLVLS LFLLRRIDEG 240
  241 KQSAQNAAAN QKGKKDKIDR SSRFIQFVLV VFLITESPQG VFSILGGFMI LDYINYFQNL 300
  301 SIFMNILAFF NTTTSFIIYS SLSAKFRRIF AQLFLPSQVL EKIYLKRSTV VVHSIAHSSR 360
  361 TV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 51.39794 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle