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Protein Overview: lips-12

General Information:
Name(s) found: lips-12 / CE13613 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00020473 locus:lips-12 status:Partially_confirmed UniProt:O17376 protein_id:CCD63490.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid catabolic process [IEALink to PubMed article]
    Molecular Function: lipase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVFNSIVL VALATMVQAD FSEKFRDHFS NLPELLKDLS RKSQLGPAGS FGGGNHVGGA  60
   61 VTKKIPIIIV HGGGNSAGSF EKYRDHFIKQ GYSNETVYAT SWGFPTETIQ QSLEMKCEYV 120
  121 KRIRKLFFLV ASFTGGKVDI VAYGEGAPIA RKAVIGRNCV DTNQDTGNSL RNEVRAFVSV 180
  181 RGQNGGILCD PSGDKRATCL NMDIGLNCGS KFIKDINAIG KHWKEAVHSI HSIVPLLPQK 240
  241 TNCGSDSCGI PYSKVYEYDF NGVEQNVNRV VEILKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 29.154902 Pseudomonas fluorescens aryl esterase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.22413317508498 bayes_pls_golite062009
  • hydrolase activity
    		•  0.426147177494335 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle