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Protein Overview: CE13377

General Information:
Name(s) found: CE13377 [WormBase]
Description(s) found:
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  • WBGene00011582 locus:ntr-1 status:Confirmed UniProt:O02300 protein_id:CAB04712.1 [WormBase]
  • pir||T24654 hypothetical protein T07D10.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3879621|emb|CAB04712.1| C. elegans protein T07D10.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17508933|ref|NP_493193.1| hypothetical protein T07D10.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE13377 WBGene00011582 conopressin receptor like status:Partially_confirmed TR:O02300 protein_id:CAB04712.1 [wormpep150.fasta]
  • 13377 WBGene00011582 conopressin receptor like status:Partially_confirmed TR:O02300 protein_id:CAB04712.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • arginine vasopressin receptor 1A (1N215) [Caenorhabditis elegans]gi|3879621|emb|CAB04712.1| Hypothetical protein T07D10.2 [Caenorhabditis elegans]gi|7507372|pir||T24654 hypothetical protein T07D10.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • conopressin receptor like status:Partially_confirmed TR:O02300 protein_id:CAB04712.1 [wormpep115.fasta.reversed]
  • CE13377 conopressin receptor like status:Predicted TR:O02300 protein_id:CAB04712.1 [wormpep80.hongbin]
  • CE13377 WBGene00011582 conopressin receptor like status:Partially_confirmed UniProt:O02300_CAEEL protein_id:CAB04712.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13377 WBGene00011582 conopressin receptor like status:Partially_confirmed UniProt:O02300_CAEEL protein_id:CAB04712.1| [wormORF-contam.fasta]
  • T07D10.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T07D10.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE13377 WBGene00011582 conopressin receptor like status:Partially_confirmed UniProt:O02300 protein_id:CAB04712.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13377 WBGene00011582 locus:ntr-1 conopressin receptor like status:Confirmed UniProt:O02300 protein_id:CAB04712.1 [c_elegans-WS236-ecoli-05Mar2013-contam.fasta]
  • CE13377 WBGene00011582 locus:ntr-1 status:Confirmed UniProt:O02300 protein_id:CAB04712.1 [wormpep246-ecoli-contam.fasta]
  • NTR-1 OS=Caenorhabditis elegans GN=ntr-1 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAFFPVILL TPTPISSAHN LYLFQMLELQ ENITDSQPMD PPSLEIMMLH HLMIILVTLF  60
   61 GNTLLIYVIY KNNAVLRRKR VTPVQMLMLH MCAADILFAL ISVGPTMAIT ATVPFFYGPN 120
  121 LLCKLTKFLQ VIPMYASSFL LVAISADRYQ AICRPLASMK SSIYNRPALY SGIAWTAAIL 180
  181 FSTPQLYLFE KRNGDCSENY TTALQYQLYV CLFNSVVWLL PSAIAGWLYL CVCKAVWKST 240
  241 SFSSSLRNNM KKMEHMKLTE KNGGMQAHHK GATMQCVELD RRRVQTVKLT LTIVAANFVL 300
  301 WAPFCITSVI DAVWPTAINS TFATYIMFFG NLNSCMNPWL WFHFNRKQLK RACPCRKSSE 360
  361 PLIQSLVYVH VMTSEQSDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..379] PSI-BLAST 32.39794 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle