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Protein Overview: CE13096

General Information:
Name(s) found: CE13096 [WormBase]
Description(s) found:
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  • WBGene00020184 locus:uba-5 Ubiquitin-like modifier-activating enzyme 5 status:Confirmed UniProt:P91430 protein_id:CCD67786.1 [WormBase]
  • pir||T29201 hypothetical protein T03F1.1 - Caenorhabditis elegans [NCBI NR]
  • gi|1825606|gb|AAB42231.1| Hypothetical protein T03F1.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17508819|ref|NP_491248.1| hypothetical protein T03F1.1 [Caenorhabditis elegans] [NCBI NR]
  • Ubiquitin-like modifier-activating enzyme 5 OS=Caenorhabditis elegans GN=uba-5 PE=1 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE13096 WBGene00020184 status:Confirmed TR:P91430 protein_id:AAB42231.1 [wormpep150.fasta]
  • 13096 WBGene00020184 status:Confirmed TR:P91430 protein_id:AAB42231.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • thiF family protein (46.5 kD) (1E443) [Caenorhabditis elegans]gi|1825606|gb|AAB42231.1| Hypothetical protein T03F1.1 [Caenorhabditis elegans]gi|7507003|pir||T29201 hypothetical protein T03F1.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:P91430 protein_id:AAB42231.1 [wormpep115.fasta.reversed]
  • CE13096 status:Partially_confirmed TR:P91430 protein_id:AAB42231.1 [wormpep80.hongbin]
  • CE13096 WBGene00020184 status:Confirmed UniProt:P91430_CAEEL protein_id:AAB42231.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13096 WBGene00020184 status:Confirmed UniProt:P91430_CAEEL protein_id:AAB42231.1| [wormORF-contam.fasta]
  • T03F1.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T03F1.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE13096 WBGene00020184 status:Confirmed UniProt:P91430 protein_id:AAB42231.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13096 WBGene00020184 status:Confirmed UniProt:P91430 protein_id:CCD67786.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE13096 WBGene00020184 locus:uba-5 status:Confirmed UniProt:P91430 protein_id:CCD67786.1 Ubiquitin-like modifier-activating enzyme 5 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: Mo-molybdopterin cofactor biosynthetic process [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    cofactor binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDEQIDKLV SRLDGALNRL GNVKKDHPLE SSSNSKPTHQ PKSPAPYRQK IEKLSAEVVD  60
   61 SNPYSRLMAL QRMGIVNEYE RIREKTVAVV GVGGVGSVVA EMLTRCGIGK LILFDYDKVE 120
  121 IANMNRLFYQ PNQAGLSKVE AARDTLIHVN PDVQIEVHNF NITTMDNFDT FVNRIRKGSL 180
  181 TDGKIDLVLS CVDNFEARMA VNMACNEENQ IWMESGVSEN AVSGHIQYIE PGKTACFACV 240
  241 PPLVVASGID ERTLKRDGVC AASLPTTMAV VAGFLVMNTL KYLLNFGEVS QYVGYNALSD 300
  301 FFPRDSIKPN PYCDDSHCLQ RQKEYEEKVA NQPVDLEVEV PEEETVVHED NEWGIELVNE 360
  361 SEPSAEQSSS LNAGTGLKFA YEPIKRDAQT ELSPAQAATH DFMKSIKDKL VEEAQNKGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..52] MSA 2.446996 View MSA. No confident structure predictions are available.
    2 View Details [53..330] PSI-BLAST 64.69897 Molybdenum cofactor biosynthesis protein MoeB
    3 View Details [331..419] MSA 79.240997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • small protein activating enzyme activity
    		•  2.21879151659928 bayes_pls_golite062009
  • URM1 activating enzyme activity
    		•  1.72163067012054 bayes_pls_golite062009
  • catalytic activity
    		•  1.22201444897049 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle