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View Structure Prediction Details

Protein: CE13096
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13096.

Description E-value Query
Range
Subject
Range
gi|117928984, gi... - gi|88931318|ref|ZP_01137012.1| Rhodanese-like [Acidothermus cellulolyticus 11B], gi|88912597|gb|EAR3...
340.0 [0..42] [411..1]

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Predicted Domain #1
Region A:
Residues: [1-52]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDEQIDKLV SRLDGALNRL GNVKKDHPLE SSSNSKPTHQ PKSPAPYRQK IE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [53-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLSAEVVDSN PYSRLMALQR MGIVNEYERI REKTVAVVGV GGVGSVVAEM LTRCGIGKLI  60
   61 LFDYDKVEIA NMNRLFYQPN QAGLSKVEAA RDTLIHVNPD VQIEVHNFNI TTMDNFDTFV 120
  121 NRIRKGSLTD GKIDLVLSCV DNFEARMAVN MACNEENQIW MESGVSENAV SGHIQYIEPG 180
  181 KTACFACVPP LVVASGIDER TLKRDGVCAA SLPTTMAVVA GFLVMNTLKY LLNFGEVSQY 240
  241 VGYNALSDFF PRDSIKPNPY CDDSHCLQRQ KEYEEKVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.69897
Match: 1jw9B
Description: Molybdenum cofactor biosynthesis protein MoeB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
small protein activating enzyme activity 2.21879151659928 bayes_pls_golite062009
URM1 activating enzyme activity 1.72163067012054 bayes_pls_golite062009
catalytic activity 1.22201444897049 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [331-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQPVDLEVEV PEEETVVHED NEWGIELVNE SEPSAEQSSS LNAGTGLKFA YEPIKRDAQT  60
   61 ELSPAQAATH DFMKSIKDKL VEEAQNKGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle