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Protein Overview: srj-45

General Information:
Name(s) found: srj-45 / CE13078 [WormBase]
Description(s) found:
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  • WBGene00005627 locus:srj-45 status:Predicted UniProt:O16982 protein_id:CCD71816.1 [WormBase]
  • pir||T32210 hypothetical protein T03D3.6 - Caenorhabditis elegans [NCBI NR]
  • gi|17563468|ref|NP_503768.1| Serpentine Receptor, class J family member (srj-45) [Caenorhabditis elegans] [NCBI NR]
  • gi|10864479|gb|AAG24192.1| Serpentine receptor, class j protein 45 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE13078 WBGene00005627 locus:srj-45 7TM chemoreceptor, srj family status:Predicted TR:O16982 protein_id:AAG24192.1 [wormpep150.fasta]
  • 13078 WBGene00005627 locus:srj-45 7TM chemoreceptor, srj family status:Predicted TR:O16982 protein_id:AAG24192.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, serpentine Receptor, class J (srj-45) [Caenorhabditis elegans]gi|10864479|gb|AAG24192.1| Serpentine receptor, class j protein 45 [Caenorhabditis elegans]gi|7506983|pir||T32210 hypothetical protein T03D3.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:srj-45 7TM chemoreceptor, srj family status:Predicted TR:O16982 protein_id:AAG24192.1 [wormpep115.fasta.reversed]
  • CE13078 locus:srj-45 chemoreceptor status:Predicted [wormpep80.hongbin]
  • CE13078 WBGene00005627 locus:srj-45 7TM chemoreceptor, srj family status:Predicted UniProt:O16982_CAEEL protein_id:AAG24192.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13078 WBGene00005627 locus:srj-45 7TM chemoreceptor, srj family status:Predicted UniProt:O16982_CAEEL protein_id:AAG24192.1| [wormORF-contam.fasta]
  • Serpentine Receptor, class J family member (srj-45) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine receptor, class j protein 45 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE13078 WBGene00005627 locus:srj-45 7TM chemoreceptor, srj family status:Predicted UniProt:O16982 protein_id:AAG24192.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13078 WBGene00005627 locus:srj-45 7TM chemoreceptor, srj family status:Predicted UniProt:O16982 protein_id:CCD71816.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE13078 WBGene00005627 locus:srj-45 status:Predicted UniProt:O16982 protein_id:CCD71816.1 7TM GPCR, serpentine receptor class j (Srj) [wormpep246-ecoli-contam.fasta]
  • Serpentine Receptor, class J OS=Caenorhabditis elegans GN=srj-45 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: phosphopantetheine binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEDWIYKYL SRTSCALTFL VNPIFIYLIF SEKSSKFGNY RFLLLYFAFF NFIYSVVNVS  60
   61 VPLDIHNYRY SFFIFVRHGW FMERSDLNFH ILVARCSIVA SSYAVLLSHF IYRYLVISDS 120
  121 SLTRRHFHWY MTGSFLLSVV YFSLWHVTCY FPGRANFELL QYIREDFQET FGLDSTEFNM 180
  181 VGALFSVGSY ETTHRAWIAT ISWSAVSIAS ITSFFVMARL IMRKLKKMTV RTSQKTSRFQ 240
  241 FELLRALIVQ TVIPICISFS PCLLCWYGPI FGIQLDRSFN YFETTALGVF SFVDPIAIIL 300
  301 CLPIFRCRIL KCFSKTYKNN RTTSISRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 43.522879 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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