| Protein: | srj-45 |
| Organism: | Caenorhabditis elegans |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srj-45.
| Description | E-value | Query Range |
Subject Range |
|
|
193.0 | [0..2] | [327..164] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MFEDWIYKYL SRTSCALTFL VNPIFIYLIF SEKSSKFGNY RFLLLYFAFF NFIYSVVNVS 60
61 VPLDIHNYRY SFFIFVRHGW FMERSDLNFH ILVARCSIVA SSYAVLLSHF IYRYLVISDS 120
121 SLTRRHFHWY MTGSFLLSVV YFSLWHVTCY FPGRANFELL QYIREDFQET FGLDSTEFNM 180
181 VGALFSVGSY ETTHRAWIAT ISWSAVSIAS ITSFFVMARL IMRKLKKMTV RTSQKTSRFQ 240
241 FELLRALIVQ TVIPICISFS PCLLCWYGPI FGIQLDRSFN YFETTALGVF SFVDPIAIIL 300
301 CLPIFRCRIL KCFSKTYKNN RTTSISRN
|
| Detection Method: |  |
| Confidence: | 43.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
