YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: srj-45

General Information:
Name(s) found: srj-45 / CE13078 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00005627 locus:srj-45 status:Predicted UniProt:O16982 protein_id:CCD71816.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: phosphopantetheine binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEDWIYKYL SRTSCALTFL VNPIFIYLIF SEKSSKFGNY RFLLLYFAFF NFIYSVVNVS  60
   61 VPLDIHNYRY SFFIFVRHGW FMERSDLNFH ILVARCSIVA SSYAVLLSHF IYRYLVISDS 120
  121 SLTRRHFHWY MTGSFLLSVV YFSLWHVTCY FPGRANFELL QYIREDFQET FGLDSTEFNM 180
  181 VGALFSVGSY ETTHRAWIAT ISWSAVSIAS ITSFFVMARL IMRKLKKMTV RTSQKTSRFQ 240
  241 FELLRALIVQ TVIPICISFS PCLLCWYGPI FGIQLDRSFN YFETTALGVF SFVDPIAIIL 300
  301 CLPIFRCRIL KCFSKTYKNN RTTSISRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 43.522879 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle