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Protein Overview: CE13066

General Information:
Name(s) found: CE13066 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00011382 locus:dop-5 status:Partially_confirmed UniProt:O45732 protein_id:CAB07650.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 763 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSVSNGTD QNPQDLNDLQ WNAFHAFLLL LIILVVFGNT MVIFAVAVDR KLRSVTTNKF  60
   61 IASLAVSDLL VGLIVMPLSL YYKMHNDHWT LGYTWCQFHL VSGVFSTTAS IVHLVAISLD 120
  121 RYFAIMFPTE YQRHSVSTST VPYVVMIWLM ALAVSSTLFM EQRDSFDGIC WISNPQYIVL 180
  181 SSFLSFFLPG AIVVYLYMKI FKKLRNHQLY MFGQLTHRGG ERERRHSLPR VIIEEVRSRR 240
  241 GSRMSQTGSQ SGSPTRRQSG GSKERSPSQP DIHIVAKPQQ RWRSPTICAE TLAHDRLLAA 300
  301 KKRVSIVPDP PSMDVSVNMA SIDQMKDEHH HNLMREEELL GCEAGRRKQS EEEVRKLSDE 360
  361 RKRVIYERRR SSTSENPNGI PIMQAFQKAY QEVRAGRRRS TIHDITAYHF PSLTTVNEPA 420
  421 TPPPGEDCEE KEKDSDGTSI MHKLSSGSSI AETVIAMLPK TSTLSKTDSH ESSVSTEASQ 480
  481 KPLLGPPTHH YTKKSQTQKE PRYSPSIPAP TFLMVPAMMA VNTPPATPNT KEAPTNCTSL 540
  541 LQVPRLFDCP SPCSVPSNSS HSSYTSASGS SDTYRRISMN SYGSSLTDGT ESTFECDSRR 600
  601 SSAWSTIRAA VFDRQQMRGG KASVDITVDR TGSPQKKMST ISRGKLRRIA TQVTRAIRRK 660
  661 RRESMAIRRE SRATRVVAAI LIAFLICWIP YFCISIFRGV LMGFQININT PIHLTLFVYT 720
  721 SWLGYAHSCF NPLIYMCLNK NFRNTMRKMM QKTNRAKMAE QEG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 36.522879 Rhodopsin
    2 View Details [375..763] FFAS03 2.12 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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